RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 LRRC52Q8N7C0 313 aa27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 CXorf38Q8TB03 319 aa27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 DHTKD1Q96HY7 919 aaPredicted RBP27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 GZF1Q9H116 711 aaPredicted RBP27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 BACE2Q9Y5Z0 518 aa27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 ARHGEF37A1IGU5 675 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 SPTLC1O15269 473 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 GLUD1P00367 558 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 EPCAMP16422 314 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 RPL17P18621 184 aaKnown RBP27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 CSGALNACT2Q8N6G5 542 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 GPT2Q8TD30 523 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 PARD3BQ8TEW8 1205 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 MSLNLQ96KJ4 702 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 CLSTN3Q9BQT9 956 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 DZANK1Q9NVP4 752 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 SIX4Q9UIU6 781 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 AGAP1Q9UPQ3 857 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 PLXNA3P51805 1871 aa27.13■■□□□ 1.93
HERPUD2-205ENST00000427455 TSC2P49815 1807 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 H7C4K7 107 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 AKAP3O75969 853 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 C1RP00736 705 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 KRT19P08727 400 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 ODC1P11926 461 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 CD44P16070 742 aaKnown RBP27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 CCNE1P24864 410 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 PSMC2P35998 433 aaKnown RBP27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 RBP5P82980 135 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 USP37Q86T82 979 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 FAM186BQ8IYM0 893 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 PLEKHO2Q8TD55 490 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 SENP8Q96LD8 212 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 POP1Q99575 1024 aaKnown RBP27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 CD207Q9UJ71 328 aa27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 R3HCC1Q9Y3T6 440 aaKnown RBP27.12■■□□□ 1.93
HERPUD2-205ENST00000427455 LRRIQ3A6PVS8 624 aaPredicted RBP27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 PPP1R3GB7ZBB8 358 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 CETN3O15182 167 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 TYMPP19971 482 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 AP3M2P53677 418 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 PMS1P54277 932 aaKnown RBP27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 CLDN10P78369 228 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 MRPL58Q14197 206 aaKnown RBP27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 ANKRD40Q6AI12 368 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 ZNF280DQ6N043 979 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 ANKRD54Q6NXT1 300 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 INTS8Q75QN2 995 aaKnown RBP27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 TRAPPC11Q7Z392 1133 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 GLYCTKQ8IVS8 523 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 TMC2Q8TDI7 906 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 ASB2Q96Q27 587 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 MKNK1Q9BUB5 465 aa27.11■■□□□ 1.93
HERPUD2-205ENST00000427455 TRIM49BA6NDI0 452 aa27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 KPNA7A9QM74 516 aa27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 MBD3O95983 291 aa27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 HOXB8P17481 243 aaPredicted RBP27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 FKBP3Q00688 224 aaKnown RBP27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 YWHAHQ04917 246 aaPredicted RBP27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 CLUL1Q15846 466 aa27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 PUS10Q3MIT2 529 aaKnown RBP27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 KLHL10Q6JEL2 608 aa27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 ELMSAN1Q6PJG2 1045 aa27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 ZC3H3Q8IXZ2 948 aaKnown RBP27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 SMRP1Q8NCR6 262 aa27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 DPP7Q9UHL4 492 aa27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 CDY1Q9Y6F8 540 aa27.1■■□□□ 1.93
HERPUD2-205ENST00000427455 ENPEPQ07075 957 aa27.09■■□□□ 1.93
HERPUD2-205ENST00000427455 CTXN3Q4LDR2 81 aa27.09■■□□□ 1.93
HERPUD2-205ENST00000427455 SLC8B1Q6J4K2 584 aa27.09■■□□□ 1.93
HERPUD2-205ENST00000427455 FOXR2Q6PJQ5 311 aa27.09■■□□□ 1.93
HERPUD2-205ENST00000427455 PALB2Q86YC2 1186 aa27.09■■□□□ 1.93
HERPUD2-205ENST00000427455 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.09■■□□□ 1.93
HERPUD2-205ENST00000427455 BORCS6Q96GS4 357 aa27.09■■□□□ 1.93
HERPUD2-205ENST00000427455 DSEQ9UL01 958 aa27.09■■□□□ 1.93
HERPUD2-205ENST00000427455 TIMM13Q9Y5L4 95 aaPredicted RBP27.09■■□□□ 1.93
HERPUD2-205ENST00000427455 BICDL2A1A5D9 508 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 CYB561D2O14569 222 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 SLC16A3O15427 465 aaKnown RBP27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 ADAM12O43184 909 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 TGM5O43548 720 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 TBC1D4O60343 1298 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 OAZ2O95190 189 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 CYP11A1P05108 521 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 EPB41P11171 864 aaKnown RBP27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 KRT13P13646 458 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 OR1D2P34982 312 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 KCNQ1P51787 676 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 VAMP7P51809 220 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 BFSP1Q12934 665 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 MYO1EQ12965 1108 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 SMAD4Q13485 552 aaKnown RBP27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 RAB33AQ14088 237 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 RSPO2Q6UXX9 243 aaPredicted RBP27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 NELFBQ8WX92 580 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 ZNF516Q92618 1163 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 EEF2KMTQ96G04 330 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 OXCT2Q9BYC2 517 aaPredicted RBP27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 MAN1C1Q9NR34 630 aa27.08■■□□□ 1.93
HERPUD2-205ENST00000427455 CTNND2Q9UQB3 1225 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms