RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 YIPF1Q9Y548 306 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.81□□□□□ -0.36
PLOD3-204ENST00000424135 TICRRQ7Z2Z1 1910 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 CHD8Q9HCK8 2581 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 ZNF197O14709 1029 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 NCAM2O15394 837 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 HRO43593 1189 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 MICAL2O94851 1124 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 MAPTP10636 758 aaKnown RBP12.8□□□□□ -0.36
PLOD3-204ENST00000424135 CCNE1P24864 410 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 TNFSF9P41273 254 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
PLOD3-204ENST00000424135 DUSP4Q13115 394 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 PDIA5Q14554 519 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 ZRSR1Q15695 479 aaKnown RBP12.8□□□□□ -0.36
PLOD3-204ENST00000424135 CYP4A22Q5TCH4 519 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 ZNF280DQ6N043 979 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 TXNDC11Q6PKC3 985 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 Q6ZS52 159 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 APBB1IPQ7Z5R6 666 aaPredicted RBP12.8□□□□□ -0.36
PLOD3-204ENST00000424135 BEST2Q8NFU1 509 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 LRRC15Q8TF66 581 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 IRF7Q92985 503 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 ZFYVE19Q96K21 471 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 ZNF512Q96ME7 567 aaPredicted RBP12.8□□□□□ -0.36
PLOD3-204ENST00000424135 MKNK1Q9BUB5 465 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 TRPV4Q9HBA0 871 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 DNM3Q9UQ16 869 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 SLC27A5Q9Y2P5 690 aa12.8□□□□□ -0.36
PLOD3-204ENST00000424135 MRPS17Q9Y2R5 130 aaKnown RBP12.8□□□□□ -0.36
PLOD3-204ENST00000424135 A0A1W2PRU2 124 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 SLC38A8A6NNN8 435 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 CHURC1-FNTBB4DL54 471 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 MAN2B1O00754 1011 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 TOM1L1O75674 476 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 CPB1P15086 417 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.36
PLOD3-204ENST00000424135 TRAPPC10P48553 1259 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 FNTBP49356 437 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 NOLC1Q14978 699 aaKnown RBP eCLIP12.79□□□□□ -0.36
PLOD3-204ENST00000424135 ZBTB6Q15916 424 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 MFSD6LQ8IWD5 586 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 ATAD1Q8NBU5 361 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 NTPCRQ9BSD7 190 aaKnown RBP12.79□□□□□ -0.36
PLOD3-204ENST00000424135 TRPV5Q9NQA5 729 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 ASAH2Q9NR71 780 aa12.79□□□□□ -0.36
PLOD3-204ENST00000424135 RBM19Q9Y4C8 960 aaKnown RBP12.79□□□□□ -0.36
PLOD3-204ENST00000424135 CITO14578 2027 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 TTC26A0AVF1 554 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 LACTBL1A8MY62 500 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 M0QZQ0 153 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 ZNF263O14978 683 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 OAZ2O95190 189 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
PLOD3-204ENST00000424135 LMNB2Q03252 620 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 MCL1Q07820 350 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 GNL2Q13823 731 aaKnown RBP12.78□□□□□ -0.36
PLOD3-204ENST00000424135 ARSHQ5FYA8 562 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 HEATR6Q6AI08 1181 aaKnown RBP12.78□□□□□ -0.36
PLOD3-204ENST00000424135 IQCEQ6IPM2 695 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 MAMSTRQ6ZN01 415 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 PRR23BQ6ZRT6 265 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 GAREM2Q75VX8 874 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 ELMOD1Q8N336 334 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 APPL2Q8NEU8 664 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 SPIRE2Q8WWL2 714 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 DRC1Q96MC2 740 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 KIF2CQ99661 725 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 LLPHQ9BRT6 129 aaKnown RBP12.78□□□□□ -0.36
PLOD3-204ENST00000424135 SLITRK6Q9H5Y7 841 aa12.78□□□□□ -0.36
PLOD3-204ENST00000424135 CDV3Q9UKY7 258 aaKnown RBP12.78□□□□□ -0.36
PLOD3-204ENST00000424135 PDCD11Q14690 1871 aaKnown RBP12.78□□□□□ -0.36
PLOD3-204ENST00000424135 MAP1BP46821 2468 aaKnown RBP12.77□□□□□ -0.37
PLOD3-204ENST00000424135 K7ESF4 209 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 FAM189A1O60320 539 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 GDF9O60383 454 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 PLS3P13797 630 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 GUCY2CP25092 1073 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 MARCKSP29966 332 aaPredicted RBP12.77□□□□□ -0.37
PLOD3-204ENST00000424135 LRPAP1P30533 357 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 SLC12A3P55017 1021 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 YWHAHQ04917 246 aaPredicted RBP12.77□□□□□ -0.37
PLOD3-204ENST00000424135 TNK2Q07912 1038 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 ENOX2Q16206 610 aaKnown RBP12.77□□□□□ -0.37
PLOD3-204ENST00000424135 KRT79Q5XKE5 535 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 ARID3BQ8IVW6 561 aaPredicted RBP12.77□□□□□ -0.37
PLOD3-204ENST00000424135 OR10T2Q8NGX3 314 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 DEPDC1BQ8WUY9 529 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 BORCS6Q96GS4 357 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 FAM126AQ9BYI3 521 aaPredicted RBP12.77□□□□□ -0.37
PLOD3-204ENST00000424135 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.77□□□□□ -0.37
PLOD3-204ENST00000424135 GTSE1Q9NYZ3 720 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 GMEB2Q9UKD1 530 aa12.77□□□□□ -0.37
PLOD3-204ENST00000424135 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
PLOD3-204ENST00000424135 CFAP47Q6ZTR5 3102 aa12.76□□□□□ -0.37
PLOD3-204ENST00000424135 CACNA1GO43497 2377 aa12.76□□□□□ -0.37
PLOD3-204ENST00000424135 MTMR11A4FU01 709 aa12.76□□□□□ -0.37
PLOD3-204ENST00000424135 PRR5-ARHGAP8B1AHC4 643 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms