RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ZNF280DQ6N043 979 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 CES5AQ6NT32 575 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 USP37Q86T82 979 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 PALB2Q86YC2 1186 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 GBP4Q96PP9 640 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 MTMR12Q9C0I1 747 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 S1PR5Q9H228 398 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 PLEKHA4Q9H4M7 779 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 INTS13Q9NVM9 706 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 DMAC2Q9NW81 257 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 USP15Q9Y4E8 981 aaPredicted RBP19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 TNNC2P02585 160 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 ITGB3P05106 788 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 DLATP10515 647 aaKnown RBP19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 ODC1P11926 461 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 POLR2BP30876 1174 aaKnown RBP19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 YWHAHQ04917 246 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 RAB33AQ14088 237 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 NFIL3Q16649 462 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 DUOXA2Q1HG44 320 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 SV2CQ496J9 727 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 GJD3Q8N144 294 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 LRRC52Q8N7C0 313 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 C1orf127Q8N9H9 656 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 ERCC4Q92889 916 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 MFSD14AQ96MC6 490 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 CGRRF1Q99675 332 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 OXCT2Q9BYC2 517 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 ADAM7Q9H2U9 754 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 PRKAG3Q9UGI9 489 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 R3HCC1Q9Y3T6 440 aaKnown RBP19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 CDY1Q9Y6F8 540 aa19.44■□□□□ 0.7
SEMA3B-201ENST00000416295 SPTLC1O15269 473 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 TNNI1P19237 187 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 TYMPP19971 482 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 RPL13P26373 211 aaKnown RBP19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 OR1D2P34982 312 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 RBP5P82980 135 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 MRPL58Q14197 206 aaKnown RBP19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 CTXN3Q4LDR2 81 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 RARS2Q5T160 578 aaKnown RBP19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 SLC8B1Q6J4K2 584 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 LILRA6Q6PI73 481 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 SMYD4Q8IYR2 804 aaPredicted RBP19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 CSGALNACT2Q8N6G5 542 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 KREMEN2Q8NCW0 462 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 SUSD6Q92537 303 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 CCDC127Q96BQ5 260 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 SENP8Q96LD8 212 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 APOL5Q9BWW9 433 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 DSEQ9UL01 958 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 AGAP1Q9UPQ3 857 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 FRMD4BQ9Y2L6 1034 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 VWA8A3KMH1 1905 aa19.43■□□□□ 0.7
SEMA3B-201ENST00000416295 ADAM12O43184 909 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 OAZ2O95190 189 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 KRT19P08727 400 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 COL9A1P20849 921 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 NR2F2P24468 414 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 SSTR3P32745 418 aaPredicted RBP19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 PPP1R2P41236 205 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 PRCPP42785 496 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 STIM1Q13586 685 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 CBX2Q14781 532 aaPredicted RBP19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 EDRF1Q3B7T1 1238 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 ZCWPW2Q504Y3 356 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 CEP135Q66GS9 1140 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 LMBRD2Q68DH5 695 aaPredicted RBP19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 CMASQ8NFW8 434 aaPredicted RBP19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 OR5B17Q8NGF7 314 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 RIPOR3Q96MK2 946 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 NECTIN4Q96NY8 510 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 POP1Q99575 1024 aaKnown RBP19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 FBXW11Q9UKB1 542 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 MAN1B1Q9UKM7 699 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 PTPRJQ12913 1337 aa19.42■□□□□ 0.7
SEMA3B-201ENST00000416295 KPNA7A9QM74 516 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 MAPK13O15264 365 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 TBC1D4O60343 1298 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 CYP11A1P05108 521 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 SPATA31D3P0C874 917 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 MTHFRP42898 656 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 MYO1EQ12965 1108 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 LIN9Q5TKA1 542 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 OVOS1Q6IE37 1185 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 RSPO2Q6UXX9 243 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 TMC5Q6UXY8 1006 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 CYP26C1Q6V0L0 522 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 C15orf39Q6ZRI6 1047 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 SPATA31D4Q6ZUB0 917 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 C12orf76Q8N812 135 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 CXorf38Q8TB03 319 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 TSG101Q99816 390 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 ZDHHC7Q9NXF8 308 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 SIX4Q9UIU6 781 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 FBXL5Q9UKA1 691 aa19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 TIMM13Q9Y5L4 95 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-201ENST00000416295 CYB561D2O14569 222 aa19.4■□□□□ 0.7
SEMA3B-201ENST00000416295 CASP4P49662 377 aa19.4■□□□□ 0.7
SEMA3B-201ENST00000416295 AP3M2P53677 418 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms