RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 QRICH1Q2TAL8 776 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 PLA2G4EQ3MJ16 856 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 SUPT20HL1Q3ZLR7 823 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 KDM7AQ6ZMT4 941 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 GALNTL5Q7Z4T8 443 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 SLC9B2Q86UD5 537 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 DCLK2Q8N568 766 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 C3orf20Q8ND61 904 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 WNK4Q96J92 1243 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 ELP3Q9H9T3 547 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 PICK1Q9NRD5 415 aa10.01□□□□□ -0.81
SNHG3-201ENST00000413987 SEC63Q9UGP8 760 aaKnown RBP10.01□□□□□ -0.81
SNHG3-201ENST00000413987 SCN4AP35499 1836 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 WDR90Q96KV7 1748 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 N4BP3O15049 544 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 ACTN4O43707 911 aaKnown RBP10□□□□□ -0.81
SNHG3-201ENST00000413987 PPFIA2O75334 1257 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 ATP1A1P05023 1023 aaKnown RBP10□□□□□ -0.81
SNHG3-201ENST00000413987 RHCEP18577 417 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 CCNFP41002 786 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 TOB1P50616 345 aaPredicted RBP10□□□□□ -0.81
SNHG3-201ENST00000413987 RHDQ02161 417 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 IFFO1Q0D2I5 559 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 PWP1Q13610 501 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 CUL4BQ13620 913 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 SNCBQ16143 134 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 ANKDD1AQ495B1 522 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 KDELC1Q6UW63 502 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 GPR155Q7Z3F1 870 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 NOSTRINQ8IVI9 506 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 CPA6Q8N4T0 437 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 ZNF540Q8NDQ6 660 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 DCAF4Q8WV16 495 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 CAVIN3Q969G5 261 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 BARHL2Q9NY43 387 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 DKK3Q9UBP4 350 aa10□□□□□ -0.81
SNHG3-201ENST00000413987 EIF2B4Q9UI10 523 aaKnown RBP10□□□□□ -0.81
SNHG3-201ENST00000413987 H0YC42 278 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 TMOD1P28289 359 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 TNFRSF8P28908 595 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 SLC8A1P32418 973 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 KRT2P35908 639 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 GCGRP47871 477 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 PMS1P54277 932 aaKnown RBP9.99□□□□□ -0.81
SNHG3-201ENST00000413987 POLR2FP61218 127 aaKnown RBP9.99□□□□□ -0.81
SNHG3-201ENST00000413987 CLUL1Q15846 466 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 UBE2SQ16763 222 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 SLC10A6Q3KNW5 377 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 CCDC122Q5T0U0 273 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 FAM205BPQ63HN1 556 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 DSTYKQ6XUX3 929 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 ARHGEF18Q6ZSZ5 1173 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 PIK3AP1Q6ZUJ8 805 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 NEK10Q6ZWH5 1172 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 ZNF572Q7Z3I7 529 aaPredicted RBP9.99□□□□□ -0.81
SNHG3-201ENST00000413987 CCDC116Q8IYX3 515 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 CBARPQ8N350 705 aaPredicted RBP9.99□□□□□ -0.81
SNHG3-201ENST00000413987 OR8K1Q8NGG5 319 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 CFAP36Q96G28 342 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 NT5C1BQ96P26 610 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 PTPN22Q9Y2R2 807 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 SRPRBQ9Y5M8 271 aaKnown RBP9.99□□□□□ -0.81
SNHG3-201ENST00000413987 APOA4P06727 396 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 CYLC1P35663 651 aaPredicted RBP9.99□□□□□ -0.81
SNHG3-201ENST00000413987 HADHAP40939 763 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 GIPRP48546 466 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 STAT2P52630 851 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 AP1B1Q10567 949 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 ZBTB17Q13105 803 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 NAA35Q5VZE5 725 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 ZER1Q7Z7L7 766 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 FERMT2Q96AC1 680 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 OTUD5Q96G74 571 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 GDAP1L1Q96MZ0 367 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 TMEM74Q96NL1 305 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 TSGA10Q9BZW7 698 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.99□□□□□ -0.81
SNHG3-201ENST00000413987 SH3BGRL2Q9UJC5 107 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 PCDHB6Q9Y5E3 794 aa9.99□□□□□ -0.81
SNHG3-201ENST00000413987 PHIPQ8WWQ0 1821 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 SMCO2A6NFE2 343 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 B4DLN1 442 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 M0R2N6 131 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 ENC1O14682 589 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 ZBTB5O15062 677 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 PPP1R12BO60237 982 aaPredicted RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 TGDSO95455 350 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 THEGLP0DJG4 465 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 MYBL2P10244 700 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 PRLRP16471 622 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 LSP1P33241 339 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 GRIK1P39086 918 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 PDCLQ13371 301 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 SCARB2Q14108 478 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 SPARCL1Q14515 664 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 AP1ARQ63HQ0 302 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 CHST15Q7LFX5 561 aaPredicted RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 KIAA1328Q86T90 577 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 VPS52Q8N1B4 723 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 ZNF280CQ8ND82 737 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms