RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 MTHFRP42898 656 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 SCNN1GP51170 649 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 ENOX2Q16206 610 aaKnown RBP11.42□□□□□ -0.58
RPAIN-204ENST00000405578 SLC10A6Q3KNW5 377 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 ZCWPW2Q504Y3 356 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 CEP135Q66GS9 1140 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 NT5DC4Q86YG4 428 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 BRSK2Q8IWQ3 736 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 ZDHHC14Q8IZN3 488 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 CSGALNACT2Q8N6G5 542 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 CACTINQ8WUQ7 758 aaKnown RBP11.42□□□□□ -0.58
RPAIN-204ENST00000405578 ZFP42Q96MM3 310 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 FNBP1Q96RU3 617 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 ADAM7Q9H2U9 754 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 SEMA4AQ9H3S1 761 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 TBC1D13Q9NVG8 400 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 DLL3Q9NYJ7 618 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 CNTN3Q9P232 1028 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 CTNND2Q9UQB3 1225 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 DERAQ9Y315 318 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 R3HCC1Q9Y3T6 440 aaKnown RBP11.42□□□□□ -0.58
RPAIN-204ENST00000405578 HCFC2Q9Y5Z7 792 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 BAHCC1Q9P281 2608 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 MIA3Q5JRA6 1907 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 SMIM28A0A1B0GU29 152 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 TTC26A0AVF1 554 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 MAPK13O15264 365 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 SLC16A3O15427 465 aaKnown RBP11.41□□□□□ -0.58
RPAIN-204ENST00000405578 ZC3H11AO75152 810 aaKnown RBP eCLIP11.41□□□□□ -0.58
RPAIN-204ENST00000405578 GNA14O95837 355 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 ALDH2P05091 517 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 KCNE1P15382 129 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 CD44P16070 742 aaKnown RBP11.41□□□□□ -0.58
RPAIN-204ENST00000405578 PPM1AP35813 382 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 TNFSF9P41273 254 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 ITIH3Q06033 890 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 TYRO3Q06418 890 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 TMEM132DQ14C87 1099 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 DPCR1Q3MIW9 517 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 XKR4Q5GH76 650 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 ZBTB41Q5SVQ8 909 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 RARS2Q5T160 578 aaKnown RBP11.41□□□□□ -0.58
RPAIN-204ENST00000405578 ANKRD40Q6AI12 368 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 ALKAL1Q6UXT8 129 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 INTS8Q75QN2 995 aaKnown RBP11.41□□□□□ -0.58
RPAIN-204ENST00000405578 CBWD2Q8IUF1 395 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 FAM186BQ8IYM0 893 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 BEST2Q8NFU1 509 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 CEP63Q96MT8 703 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 UROC1Q96N76 676 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 ZNF558Q96NG5 402 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 RTP3Q9BQQ7 232 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 TMEM175Q9BSA9 504 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 MKNK1Q9BUB5 465 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 CWH43Q9H720 699 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 RNF19AQ9NV58 838 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 DMAC2Q9NW81 257 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 UBQLN1Q9UMX0 589 aaKnown RBP11.41□□□□□ -0.58
RPAIN-204ENST00000405578 LZTS1Q9Y250 596 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 C2CD2Q9Y426 696 aa11.41□□□□□ -0.58
RPAIN-204ENST00000405578 SYCE3A1L190 88 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 LACTBL1A8MY62 500 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 CAVIN2O95810 425 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 ADRB2P07550 413 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 CYP3A5P20815 502 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 AP3M2P53677 418 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 STX17P56962 302 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 PLCB3Q01970 1234 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 TUSC3Q13454 348 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 PSMD6Q15008 389 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 DUOXA2Q1HG44 320 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 GLRA4Q5JXX5 417 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 TTI2Q6NXR4 508 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 CRELD2Q6UXH1 353 aaPredicted RBP11.4□□□□□ -0.58
RPAIN-204ENST00000405578 FAM114A1Q8IWE2 563 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 SIX5Q8N196 739 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 DCLK2Q8N568 766 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 C12orf76Q8N812 135 aaPredicted RBP11.4□□□□□ -0.58
RPAIN-204ENST00000405578 RIN2Q8WYP3 895 aaPredicted RBP11.4□□□□□ -0.58
RPAIN-204ENST00000405578 CCDC127Q96BQ5 260 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
RPAIN-204ENST00000405578 ANKRD36BP1Q96IX9 119 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 ANP32EQ9BTT0 268 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 COLEC11Q9BWP8 271 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 METTL14Q9HCE5 456 aaKnown RBP11.4□□□□□ -0.58
RPAIN-204ENST00000405578 NGRNQ9NPE2 291 aaKnown RBP11.4□□□□□ -0.58
RPAIN-204ENST00000405578 STK39Q9UEW8 545 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 PUF60Q9UHX1 559 aaKnown RBP11.4□□□□□ -0.58
RPAIN-204ENST00000405578 FBXL21Q9UKT6 434 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 CHD6Q8TD26 2715 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 CACNA1IQ9P0X4 2223 aa11.4□□□□□ -0.58
RPAIN-204ENST00000405578 CHD8Q9HCK8 2581 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 TRIM49BA6NDI0 452 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 PTGESO14684 152 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 STX10O60499 249 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 AKAP3O75969 853 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 TNNC2P02585 160 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 TMEM191BP0C7N4 346 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms