RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 TMEM169Q96HH4 297 aa16.91■□□□□ 0.3
CDPF1-204ENST00000404744 FAM81BQ96LP2 452 aa16.91■□□□□ 0.3
CDPF1-204ENST00000404744 MMS19Q96T76 1030 aa16.91■□□□□ 0.3
CDPF1-204ENST00000404744 VRTNQ9H8Y1 702 aa16.91■□□□□ 0.3
CDPF1-204ENST00000404744 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
CDPF1-204ENST00000404744 ADAM28Q9UKQ2 775 aa16.91■□□□□ 0.3
CDPF1-204ENST00000404744 SNX9Q9Y5X1 595 aa16.91■□□□□ 0.3
CDPF1-204ENST00000404744 LRRN2O75325 713 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 CA3P07451 260 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 ZNF75DP51815 510 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 KRT17Q04695 432 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 ELAVL2Q12926 359 aaKnown RBP16.9■□□□□ 0.3
CDPF1-204ENST00000404744 SCARA3Q6AZY7 606 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 PPM1KQ8N3J5 372 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 C3orf58Q8NDZ4 430 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 LMO3Q8TAP4 145 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 CLP1Q92989 425 aaKnown RBP16.9■□□□□ 0.3
CDPF1-204ENST00000404744 PBX4Q9BYU1 374 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 XYLT2Q9H1B5 865 aa16.9■□□□□ 0.3
CDPF1-204ENST00000404744 FAM207AQ9NSI2 230 aaPredicted RBP16.9■□□□□ 0.3
CDPF1-204ENST00000404744 LINC01553A4QN01 128 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 CYB561D2O14569 222 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 ADCY5O95622 1261 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 TRIM21P19474 475 aaKnown RBP16.89■□□□□ 0.29
CDPF1-204ENST00000404744 TBXAS1P24557 533 aaPredicted RBP16.89■□□□□ 0.29
CDPF1-204ENST00000404744 CTNNB1P35222 781 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 BRCC3P46736 316 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 PTPN21Q16825 1174 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 HABP4Q5JVS0 413 aaKnown RBP16.89■□□□□ 0.29
CDPF1-204ENST00000404744 TATDN2Q93075 761 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 ELMO3Q96BJ8 720 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 MRFAP1L1Q96HT8 127 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 IGSF21Q96ID5 467 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 FAXDC2Q96IV6 333 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 SAMD11Q96NU1 681 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 NUP58Q9BVL2 599 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 NIF3L1Q9GZT8 377 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 UBE2TQ9NPD8 197 aaPredicted RBP16.89■□□□□ 0.29
CDPF1-204ENST00000404744 PLCB1Q9NQ66 1216 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 GDAP2Q9NXN4 497 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 APEX2Q9UBZ4 518 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 SIK3Q9Y2K2 1263 aa16.89■□□□□ 0.29
CDPF1-204ENST00000404744 SF3B1O75533 1304 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDPF1-204ENST00000404744 COL4A6Q14031 1691 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 A0A1W2PPC1 479 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 SPTLC1O15269 473 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 ODC1P11926 461 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 BMPR1AP36894 532 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 PBX2P40425 430 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 KLK7P49862 253 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 MFAP3P55082 362 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 TIGD5Q53EQ6 642 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 KLHDC7AQ5VTJ3 777 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 FUT10Q6P4F1 479 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 SCARA5Q6ZMJ2 495 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 METTL23Q86XA0 190 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 DRC7Q8IY82 874 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 SLC39A11Q8N1S5 342 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 APPL2Q8NEU8 664 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 SENP8Q96LD8 212 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 TGS1Q96RS0 853 aaKnown RBP16.88■□□□□ 0.29
CDPF1-204ENST00000404744 PRO3102Q9H379 93 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 SLC28A3Q9HAS3 691 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 APOBEC3GQ9HC16 384 aaKnown RBP16.88■□□□□ 0.29
CDPF1-204ENST00000404744 STK39Q9UEW8 545 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 POLIQ9UNA4 740 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 DAAM1Q9Y4D1 1078 aa16.88■□□□□ 0.29
CDPF1-204ENST00000404744 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDPF1-204ENST00000404744 F8W810 466 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 I3L4J1 428 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 ITGB1P05556 798 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 TPM1P09493 284 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 RFX1P22670 979 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 AARSP49588 968 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDPF1-204ENST00000404744 YWHAEP62258 255 aaKnown RBP16.87■□□□□ 0.29
CDPF1-204ENST00000404744 SPECC1LQ69YQ0 1117 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 PHLDB3Q6NSJ2 640 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 RRAGAQ7L523 313 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 ENOSF1Q7L5Y1 443 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 DPH6Q7L8W6 267 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 CACNA2D4Q7Z3S7 1137 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 SUSD3Q96L08 255 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 PLVAPQ9BX97 442 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 NKX2-4Q9H2Z4 354 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 MARCH5Q9NX47 278 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 PUF60Q9UHX1 559 aaKnown RBP16.87■□□□□ 0.29
CDPF1-204ENST00000404744 DNAJC12Q9UKB3 198 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 DSEQ9UL01 958 aa16.87■□□□□ 0.29
CDPF1-204ENST00000404744 COLQQ9Y215 455 aaPredicted RBP16.87■□□□□ 0.29
CDPF1-204ENST00000404744 YBX2Q9Y2T7 364 aaKnown RBP16.87■□□□□ 0.29
CDPF1-204ENST00000404744 FGF18O76093 207 aa16.86■□□□□ 0.29
CDPF1-204ENST00000404744 RB1P06400 928 aa16.86■□□□□ 0.29
CDPF1-204ENST00000404744 IGFBP6P24592 240 aaPredicted RBP16.86■□□□□ 0.29
CDPF1-204ENST00000404744 SMAD3P84022 425 aaKnown RBP16.86■□□□□ 0.29
CDPF1-204ENST00000404744 APBA1Q02410 837 aa16.86■□□□□ 0.29
CDPF1-204ENST00000404744 GCNT1Q02742 428 aa16.86■□□□□ 0.29
CDPF1-204ENST00000404744 CUL2Q13617 745 aa16.86■□□□□ 0.29
CDPF1-204ENST00000404744 RAPGEF1Q13905 1077 aa16.86■□□□□ 0.29
CDPF1-204ENST00000404744 ARHGAP44Q17R89 818 aa16.86■□□□□ 0.29
CDPF1-204ENST00000404744 FAM171A1Q5VUB5 890 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms