RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 TUFT1Q9NNX1 390 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 ADGBQ8N7X0 1667 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 FAM47E-STBD1D6RA91 191 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 NFIBO00712 420 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 KCNA3P22001 575 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 SOX11P35716 441 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 ATXN3P54252 364 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 CNTN1Q12860 1018 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 CSTF3Q12996 717 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 SGO1Q5FBB7 561 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 UVRAGQ9P2Y5 699 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 AIM2O14862 343 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 SASH1O94885 1247 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 CYP2C19P33261 490 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 MTIF3Q9H2K0 278 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 CAPN10Q9HC96 672 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 TSC22D4Q9Y3Q8 395 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 ZRANB3Q5FWF4 1079 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 PGK2P07205 417 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 CHN1P15882 459 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 SOX6P35712 828 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 RBP5P82980 135 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 ARID5BQ14865 1188 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 TMEM132DQ14C87 1099 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 UGT3A1Q6NUS8 523 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 TMEM154Q6P9G4 183 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 CCDC81Q6ZN84 652 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 CCDC60Q8IWA6 550 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 RNF149Q8NC42 400 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 MTERF3Q96E29 417 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 WDR35Q9P2L0 1181 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 CFAP65Q6ZU64 1925 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 CFAP99D6REC4 459 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 ATP1A1P05023 1023 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 RGS2P41220 211 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 MCAMP43121 646 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 ANXA11P50995 505 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 PTPN12Q05209 780 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 PIGHQ14442 188 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 ERAP2Q6P179 960 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 IFNEQ86WN2 208 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 PABPC5Q96DU9 382 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 STRBPQ96SI9 672 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 CCT7Q99832 543 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 LBHD1Q9BQE6 289 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 EPN3Q9H201 632 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 POLD4Q9HCU8 107 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 BARHL2Q9NY43 387 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 GGT7Q9UJ14 662 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 SOX13Q9UN79 622 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 ALOX15P16050 662 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 GUCA1AP43080 201 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 RPS6P62753 249 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 USP39Q53GS9 565 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 LRIG3Q6UXM1 1119 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 CCDC103Q8IW40 242 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 WNK4Q96J92 1243 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 SPASTQ9UBP0 616 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 AGAP1Q9UPQ3 857 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 F8W810 466 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 USP1O94782 785 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 DARSP14868 501 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 TCN1P20061 433 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 CHI3L1P36222 383 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 TWF1Q12792 350 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 PTK6Q13882 451 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 IL1RL2Q9HB29 575 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 FBXO2Q9UK22 296 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 MTO1Q9Y2Z2 717 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 SPRP35270 261 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 RGS7P49802 495 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 PTK7Q13308 1070 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 STAG2Q8N3U4 1231 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 GPR63Q9BZJ6 419 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 RPAP3Q9H6T3 665 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 RAB6BQ9NRW1 208 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 AMACRQ9UHK6 382 aa12.87□□□□□ -0.35
CACNA1C-219ENST00000399649 MYO5CQ9NQX4 1742 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 TBC1D10CQ8IV04 446 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 CPA5Q8WXQ8 436 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 PPCSQ9HAB8 311 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 JPH1Q9HDC5 661 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 HEATR9A2RTY3 570 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 KIF1CO43896 1103 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 DDHD2O94830 711 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 LONRF1Q17RB8 773 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 TRIM65Q6PJ69 517 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms