RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 PGM2Q96G03 612 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CCDC114Q96M63 670 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CGRRF1Q99675 332 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 DDX23Q9BUQ8 820 aaKnown RBP19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 KIAA0754O94854 1291 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MARK3P27448 753 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 STAT5BP51692 787 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 IFT88Q13099 833 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 VGLL4Q14135 290 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TCHPQ9BT92 498 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 AAASQ9NRG9 546 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 GPRC5DQ9NZD1 345 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SRRM3A6NNA2 597 aaPredicted RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 USP2O75604 605 aaPredicted RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CHKAP35790 457 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 LBX2Q6XYB7 198 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 NCAPG2Q86XI2 1143 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 OTUD6BQ8N6M0 293 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PRPF31Q8WWY3 499 aaKnown RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SOWAHBA6NEL2 793 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ACSL3O95573 720 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PAEPP09466 180 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CHN1P15882 459 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CD58P19256 250 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TCF7P36402 384 aaPredicted RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TARBP2Q15633 366 aaKnown RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 LY6KQ17RY6 165 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 LIN9Q5TKA1 542 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ANKS1BQ7Z6G8 1248 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 DCLK3Q9C098 648 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CDC42EP4Q9H3Q1 356 aaKnown RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 KLHL11Q9NVR0 708 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 DDX20Q9UHI6 824 aaKnown RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TLR3O15455 904 aaKnown RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ADCY3O60266 1144 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PREPLQ4J6C6 727 aaPredicted RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ZNF394Q53GI3 561 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RNF187Q5TA31 235 aaPredicted RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SLCO2A1Q92959 643 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ZNF668Q96K58 619 aaPredicted RBP19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PWWP2AQ96N64 755 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PAGR1Q9BTK6 254 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ADAM7Q9H2U9 754 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SNCAIPQ9Y6H5 919 aa19.49■□□□□ 0.71
CHRFAM7A-202ENST00000397827 LTBP3Q9NS15 1303 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SRGAP2CP0DJJ0 459 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CCDC38Q502W7 563 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 NOL9Q5SY16 702 aaKnown RBP19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TRIM50Q86XT4 487 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MTFR1LQ9H019 292 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CNOT10Q9H9A5 744 aaKnown RBP19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 NRBP2Q9NSY0 501 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 IVDP26440 423 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RPL7AP62424 266 aaKnown RBP19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ADCY2Q08462 1091 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 LONRF1Q17RB8 773 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ATP13A4Q4VNC1 1196 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SH3D19Q5HYK7 790 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 C6orf118Q5T5N4 469 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PRUNE1Q86TP1 453 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ZNF606Q8WXB4 792 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MTMR12Q9C0I1 747 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CCDC113Q9H0I3 377 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 WHRNQ9P202 907 aa19.48■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RASGRF2O14827 1237 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TCF4P15884 667 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ITGA8P53708 1063 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 INHBEP58166 350 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PTP4A2Q12974 167 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MICALCLQ6ZW33 695 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SPATS2Q86XZ4 545 aaKnown RBP19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 LRRC71Q8N4P6 559 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 XPO6Q96QU8 1125 aaKnown RBP19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TMEM134Q9H6X4 195 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TBXAS1P24557 533 aaPredicted RBP19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RFC5P40937 340 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MMP13P45452 471 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 KLF1Q13351 362 aaPredicted RBP19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 AUHQ13825 339 aaKnown RBP19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ERMARDQ5T6L9 678 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PLEKHA7Q6IQ23 1121 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RHOT1Q8IXI2 618 aa19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TRIM6Q9C030 488 aaPredicted RBP19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MRPL47Q9HD33 250 aaKnown RBP19.47■□□□□ 0.71
CHRFAM7A-202ENST00000397827 POTEJP0CG39 1038 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ADCY8P40145 1251 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SF3A3Q12874 501 aaKnown RBP eCLIP19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TRIM72Q6ZMU5 477 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PHF13Q86YI8 300 aaPredicted RBP19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SNF8Q96H20 258 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PI4K2BG5E9Z4 385 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MSCO60682 206 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MAFO75444 373 aaPredicted RBP19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ITIH2P19823 946 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CDR1P51861 262 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MYL6P60660 151 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 IRX1P78414 480 aaPredicted RBP19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PTK6Q13882 451 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms