RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 SPDYE16A6NNV3 312 aaPredicted RBP9.87□□□□□ -0.83
NDE1-201ENST00000396354 DIAPH2O60879 1101 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 LYPLA2O95372 231 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 ATP4AP20648 1035 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 NPTX2P47972 431 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 MFAP3P55082 362 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 NCKAP1LP55160 1127 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 GTF2BQ00403 316 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 DMP1Q13316 513 aaPredicted RBP9.87□□□□□ -0.83
NDE1-201ENST00000396354 P3H1Q32P28 736 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 VSIG1Q86XK7 387 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 SLC9A9Q8IVB4 645 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 SUGP1Q8IWZ8 645 aaKnown RBP9.87□□□□□ -0.83
NDE1-201ENST00000396354 GPC2Q8N158 579 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 ATXN2LQ8WWM7 1075 aaKnown RBP9.87□□□□□ -0.83
NDE1-201ENST00000396354 MKNK1Q9BUB5 465 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 CYP39A1Q9NYL5 469 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 KCND2Q9NZV8 630 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 PCDHB4Q9Y5E5 795 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 RASSF9O75901 435 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 TARSP26639 723 aaKnown RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 PIK3CAP42336 1068 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 ELF3P78545 371 aaPredicted RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 C6orf118Q5T5N4 469 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 CYP4A22Q5TCH4 519 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 C4orf19Q8IY42 314 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 ZWILCHQ9H900 591 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 C1orf112Q9NSG2 853 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 RAB20Q9NX57 234 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 GPRC5DQ9NZD1 345 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 UMODL1Q5DID0 1318 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 A0A0A6YYK5 440 aaPredicted RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 EXOC1LA0A1B0GW35 172 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 ZBED4O75132 1171 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 CSDE1O75534 798 aaKnown RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 MARK3P27448 753 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 EIF3BP55884 814 aaKnown RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 RPL7AP62424 266 aaKnown RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 GAD2Q05329 585 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 DHX34Q14147 1143 aaKnown RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 CNGA2Q16280 664 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 IZUMO3Q5VZ72 239 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 KRT39Q6A163 491 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 TAOK1Q7L7X3 1001 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 KCTD17Q8N5Z5 321 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 NSMCE1Q8WV22 266 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 ZBTB10Q96DT7 871 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 HAPLN2Q9GZV7 340 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 ETNK1Q9HBU6 452 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 HOMER3Q9NSC5 361 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 NKIRAS1Q9NYS0 192 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.86□□□□□ -0.832e-6■■■□□ 14.7
NDE1-201ENST00000396354 PEX5P50542 639 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 ALDH5A1P51649 535 aaPredicted RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 TAS2R40P59535 323 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 PSMC5P62195 406 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 ANKS1BQ7Z6G8 1248 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 SPATS2Q86XZ4 545 aaKnown RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 FBXL13Q8NEE6 735 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 MOV10L1Q9BXT6 1211 aaKnown RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 CNOT10Q9H9A5 744 aaKnown RBP9.86□□□□□ -0.83
NDE1-201ENST00000396354 TBC1D22BQ9NU19 505 aa9.86□□□□□ -0.83
NDE1-201ENST00000396354 NCANO14594 1321 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 BTNL10A8MVZ5 291 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 WDR64B1ANS9 1081 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 GRIN3BO60391 1043 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 NEBLO76041 1014 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 ATP6V1G2O95670 118 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 GAS8O95995 478 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 KRT16P08779 473 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 LIG4P49917 911 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 KIF22Q14807 665 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 PPP2R5AQ15172 486 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 CATSPERGQ6ZRH7 1159 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 MOB2Q70IA6 237 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 ZBED8Q8IZ13 594 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 MICAL1Q8TDZ2 1067 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 AGAP11Q8TF27 550 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 TLCD1Q96CP7 247 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 DDX27Q96GQ7 796 aaKnown RBP9.85□□□□□ -0.83
NDE1-201ENST00000396354 ZNF317Q96PQ6 595 aaPredicted RBP9.85□□□□□ -0.83
NDE1-201ENST00000396354 RBM15Q96T37 977 aaKnown RBP eCLIP9.85□□□□□ -0.833e-6■■■□□ 16.1
NDE1-201ENST00000396354 PDLIM7Q9NR12 457 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 ADAM22Q9P0K1 906 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 NOCTQ9UK39 431 aaKnown RBP9.85□□□□□ -0.83
NDE1-201ENST00000396354 TBX20Q9UMR3 447 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 AFG3L2Q9Y4W6 797 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 PTPRJQ12913 1337 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 LRRD1A4D1F6 860 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 FAM187AA6NFU0 413 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 TTLL13PA6NNM8 815 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 MIF4GDA9UHW6 222 aaKnown RBP9.85□□□□□ -0.83
NDE1-201ENST00000396354 ADM5C9JUS6 153 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 SGK1O00141 431 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 PAX7P23759 505 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 MMP13P45452 471 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 GPS1Q13098 491 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 NEDD9Q14511 834 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 EFTUD2Q15029 972 aaKnown RBP eCLIP9.85□□□□□ -0.836e-8■■■■□ 25.3
NDE1-201ENST00000396354 SEPT7Q16181 437 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms