RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 AGO3Q9H9G7 860 aaKnown RBP26.29■■□□□ 1.8
CTF1-202ENST00000395019 SALL4Q9UJQ4 1053 aa26.29■■□□□ 1.8
CTF1-202ENST00000395019 KIAA0355O15063 1070 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 TACC1O75410 805 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 GHRP10912 638 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 ATICP31939 592 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 CDR2Q01850 454 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 LPIN1Q14693 890 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 FBXO47Q5MNV8 452 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 TRIM58Q8NG06 486 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 DDX1Q92499 740 aaKnown RBP26.28■■□□□ 1.8
CTF1-202ENST00000395019 ACP6Q9NPH0 428 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 SEPT11Q9NVA2 429 aaKnown RBP26.28■■□□□ 1.8
CTF1-202ENST00000395019 PCDHB4Q9Y5E5 795 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 NBNO60934 754 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 RPS6KA5O75582 802 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 CLSTN1O94985 981 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 RALGAPA2Q2PPJ7 1873 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 KIF12Q96FN5 646 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 NOX5Q96PH1 765 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 NXF3Q9H4D5 531 aaKnown RBP26.28■■□□□ 1.8
CTF1-202ENST00000395019 VRTNQ9H8Y1 702 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 ITGA11Q9UKX5 1188 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 PCDHB2Q9Y5E7 798 aa26.28■■□□□ 1.8
CTF1-202ENST00000395019 MOCS3O95396 460 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 ITGB3P05106 788 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 KRT19P08727 400 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 FMO1Q01740 532 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 ALKAL1Q6UXT8 129 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 ZNF677Q86XU0 584 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 PALB2Q86YC2 1186 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 VWCEQ96DN2 955 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 HTATIP2Q9BUP3 242 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 CNTN3Q9P232 1028 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 HES2Q9Y543 173 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 CAPN6Q9Y6Q1 641 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 CITO14578 2027 aa26.27■■□□□ 1.8
CTF1-202ENST00000395019 RECQL4O94761 1208 aa26.26■■□□□ 1.79
CTF1-202ENST00000395019 MMEP08473 750 aa26.26■■□□□ 1.79
CTF1-202ENST00000395019 GZMAP12544 262 aa26.26■■□□□ 1.79
CTF1-202ENST00000395019 GALCP54803 685 aa26.26■■□□□ 1.79
CTF1-202ENST00000395019 TAF3Q5VWG9 929 aa26.26■■□□□ 1.79
CTF1-202ENST00000395019 PCDHB18PQ96TA0 734 aa26.26■■□□□ 1.79
CTF1-202ENST00000395019 DPP3Q9NY33 737 aa26.26■■□□□ 1.79
CTF1-202ENST00000395019 ST3GAL5Q9UNP4 418 aa26.26■■□□□ 1.79
CTF1-202ENST00000395019 A0A0A6YYK5 440 aaPredicted RBP26.25■■□□□ 1.79
CTF1-202ENST00000395019 TIMP1P01033 207 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 SYN1P17600 705 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 ZBTB6Q15916 424 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 TMEM270Q6UE05 265 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 ALS2CR12Q96Q35 445 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 TSPAN18Q96SJ8 248 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 ISCUQ9H1K1 167 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 CHST12Q9NRB3 414 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 TAS2R14Q9NYV8 317 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 STAU1O95793 577 aaKnown RBP26.25■■□□□ 1.79
CTF1-202ENST00000395019 TMEM253P0C7T8 217 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 CD52P31358 61 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 ASPAP45381 313 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 ZNF132P52740 706 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 RBP5P82980 135 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 TUBB2AQ13885 445 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 TCTN1Q2MV58 587 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 XKR4Q5GH76 650 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 ZNF667Q5HYK9 610 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 TWF2Q6IBS0 349 aaKnown RBP26.25■■□□□ 1.79
CTF1-202ENST00000395019 DNAAF5Q86Y56 855 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 RBBP8NLQ8NC74 664 aaPredicted RBP26.25■■□□□ 1.79
CTF1-202ENST00000395019 DPF3Q92784 378 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 ZMAT2Q96NC0 199 aaKnown RBP26.25■■□□□ 1.79
CTF1-202ENST00000395019 TUBB2BQ9BVA1 445 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 IPPQ9Y573 584 aa26.25■■□□□ 1.79
CTF1-202ENST00000395019 ANO9A1A5B4 782 aa26.24■■□□□ 1.79
CTF1-202ENST00000395019 TMCO5BA8MYB1 307 aa26.24■■□□□ 1.79
CTF1-202ENST00000395019 GPR182O15218 404 aa26.24■■□□□ 1.79
CTF1-202ENST00000395019 BUB1O43683 1085 aa26.24■■□□□ 1.79
CTF1-202ENST00000395019 RTN2O75298 545 aa26.24■■□□□ 1.79
CTF1-202ENST00000395019 POLR2BP30876 1174 aaKnown RBP26.24■■□□□ 1.79
CTF1-202ENST00000395019 YWHAEP62258 255 aaKnown RBP26.24■■□□□ 1.79
CTF1-202ENST00000395019 SMG8Q8ND04 991 aaKnown RBP26.24■■□□□ 1.79
CTF1-202ENST00000395019 CXCL16Q9H2A7 254 aa26.24■■□□□ 1.79
CTF1-202ENST00000395019 ZMYND8Q9ULU4 1186 aaPredicted RBP26.24■■□□□ 1.79
CTF1-202ENST00000395019 MRFAP1Q9Y605 127 aa26.24■■□□□ 1.79
CTF1-202ENST00000395019 ANKRD62A6NC57 917 aa26.23■■□□□ 1.79
CTF1-202ENST00000395019 RAG1P15918 1043 aa26.23■■□□□ 1.79
CTF1-202ENST00000395019 GUCY2FP51841 1108 aa26.23■■□□□ 1.79
CTF1-202ENST00000395019 APOL6Q9BWW8 343 aa26.23■■□□□ 1.79
CTF1-202ENST00000395019 BCO2Q9BYV7 579 aa26.23■■□□□ 1.79
CTF1-202ENST00000395019 ERVK-5Q9HDB9 667 aa26.23■■□□□ 1.79
CTF1-202ENST00000395019 CISHQ9NSE2 258 aa26.23■■□□□ 1.79
CTF1-202ENST00000395019 PADI3Q9ULW8 664 aa26.23■■□□□ 1.79
CTF1-202ENST00000395019 AGAP1Q9UPQ3 857 aa26.23■■□□□ 1.79
CTF1-202ENST00000395019 AKAP5P24588 427 aa26.22■■□□□ 1.79
CTF1-202ENST00000395019 GTF2F1P35269 517 aaKnown RBP eCLIP26.22■■□□□ 1.79
CTF1-202ENST00000395019 NAP1L1P55209 391 aaKnown RBP26.22■■□□□ 1.79
CTF1-202ENST00000395019 NFX1Q12986 1120 aaKnown RBP26.22■■□□□ 1.79
CTF1-202ENST00000395019 IFI16Q16666 785 aaKnown RBP26.22■■□□□ 1.79
CTF1-202ENST00000395019 TMEM130Q8N3G9 435 aa26.22■■□□□ 1.79
CTF1-202ENST00000395019 BEST2Q8NFU1 509 aa26.22■■□□□ 1.79
CTF1-202ENST00000395019 CTNNBL1Q8WYA6 563 aaPredicted RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms