RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CLEC16AQ2KHT3 1053 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 PAPD7Q5XG87 772 aaKnown RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 LRRN4CLQ8ND94 238 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 SLC35G2Q8TBE7 412 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 C18orf25Q96B23 403 aaPredicted RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 CAPZA3Q96KX2 299 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 ZMAT2Q96NC0 199 aaKnown RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 MMS19Q96T76 1030 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 TSEN34Q9BSV6 310 aaKnown RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 ISCUQ9H1K1 167 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 STARD7Q9NQZ5 370 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 CTTNBP2NLQ9P2B4 639 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 DERAQ9Y315 318 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 RALGAPA2Q2PPJ7 1873 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 NCANO14594 1321 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 GRID2IPA4D2P6 1211 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 KBTBD13C9JR72 458 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 TLR3O15455 904 aaKnown RBP9.23□□□□□ -0.93
TDP1-203ENST00000393454 TFRCP02786 760 aaKnown RBP9.23□□□□□ -0.93
TDP1-203ENST00000393454 GHRP10912 638 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 TNNC1P63316 161 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 AMPD2Q01433 879 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 PTPN11Q06124 597 aaPredicted RBP9.23□□□□□ -0.93
TDP1-203ENST00000393454 MGAT3Q09327 533 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 PAK2Q13177 524 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 PTPROQ16827 1216 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 WHAMMP3Q1A5X7 153 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 ACAD10Q6JQN1 1059 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 RPAINQ86UA6 219 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 PASD1Q8IV76 773 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 UBR7Q8N806 425 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 CEP112Q8N8E3 955 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 SMG8Q8ND04 991 aaKnown RBP9.23□□□□□ -0.93
TDP1-203ENST00000393454 TPCN2Q8NHX9 752 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 CAGE1Q8TC20 777 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 CPA5Q8WXQ8 436 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 RFFLQ8WZ73 363 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 ZNF653Q96CK0 615 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 ARHGEF26Q96DR7 871 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 PSMB7Q99436 277 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.23□□□□□ -0.93
TDP1-203ENST00000393454 SMYD3Q9H7B4 428 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 OSGEPQ9NPF4 335 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 CNTN3Q9P232 1028 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 TUBGCP4Q9UGJ1 667 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 CNTN6Q9UQ52 1028 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 PCDHGC5Q9Y5F6 944 aa9.23□□□□□ -0.93
TDP1-203ENST00000393454 SMIM28A0A1B0GU29 152 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 A0A1W2PQ45 241 aaPredicted RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 A0A1W2PQY0 241 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 DYNC1I1O14576 645 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 CTIFO43310 598 aaKnown RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 ATMINO43313 823 aaPredicted RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 CFHP08603 1231 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 CD19P15391 556 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 BRD2P25440 801 aaKnown RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 CD52P31358 61 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 ZNF132P52740 706 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 NAA30Q147X3 362 aaPredicted RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 NAA35Q5VZE5 725 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 ALKAL1Q6UXT8 129 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 DAAM2Q86T65 1068 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 HACE1Q8IYU2 909 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 CXorf38Q8TB03 319 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 ZNF606Q8WXB4 792 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 CYFIP2Q96F07 1278 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 BCO2Q9BYV7 579 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 SDCBP2Q9H190 292 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 UNC93B1Q9H1C4 597 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 TRPV6Q9H1D0 765 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 AGO3Q9H9G7 860 aaKnown RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 CHST12Q9NRB3 414 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 CHORDC1Q9UHD1 332 aaPredicted RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 UBQLN1Q9UMX0 589 aaKnown RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 SNX12Q9UMY4 172 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 HYOU1Q9Y4L1 999 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 DNAH12Q6ZR08 3092 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 A0A0U1RQG5 324 aaPredicted RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 XPOTO43592 962 aaKnown RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 ITGA4P13612 1032 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 NSFP46459 744 aaKnown RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 ORC1Q13415 861 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 ZBTB6Q15916 424 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 FBXO47Q5MNV8 452 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 ZNF618Q5T7W0 954 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 TRIM72Q6ZMU5 477 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 PEX26Q7Z412 305 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 RHOT2Q8IXI1 618 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 SYCE1Q8N0S2 351 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 UBXN4Q92575 508 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 OSBPL7Q9BZF2 842 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 GOLPH3Q9H4A6 298 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 CYP3A43Q9HB55 503 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 FAM105AQ9NUU6 356 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 PADI3Q9ULW8 664 aa9.22□□□□□ -0.93
TDP1-203ENST00000393454 PACSIN2Q9UNF0 486 aaPredicted RBP9.22□□□□□ -0.93
TDP1-203ENST00000393454 TMEM110-MUSTN1A8MSY1 372 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 PPEF2O14830 753 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 ZNF185O15231 689 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 CD4P01730 458 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms