RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 MTMR9Q96QG7 549 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 NUDCD1Q96RS6 583 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 FBXO44Q9H4M3 255 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 PPCSQ9HAB8 311 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 NSMCE4AQ9NXX6 385 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 OGFRQ9NZT2 677 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 KLHL8Q9P2G9 620 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 ABCA3Q99758 1704 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 SEPT4O43236 478 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 CAPN15O75808 1086 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 PSMD10O75832 226 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 LCP1P13796 627 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 TAC1P20366 129 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 GPD1P21695 349 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 P3H1Q32P28 736 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 NAA35Q5VZE5 725 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 INPP4AQ96PE3 977 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 FAM96AQ9H5X1 160 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 CCDC85CA6NKD9 419 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 DUSP11O75319 330 aaKnown RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 UPP2O95045 317 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 TRIM49P0CI25 452 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 TRIM49CP0CI26 452 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 MSH2P43246 934 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 DHX34Q14147 1143 aaKnown RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 ZNF235Q14590 738 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 KLHL38Q2WGJ6 581 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 MGAT5BQ3V5L5 792 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 SPATS2Q86XZ4 545 aaKnown RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 MAP4K3Q8IVH8 894 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 ZDHHC9Q9Y397 364 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 ANGPTL3Q9Y5C1 460 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 COBLO75128 1261 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 TMEM253P0C7T8 217 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 FIGNQ5HY92 759 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 FAF2Q96CS3 445 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 SCYL1Q96KG9 808 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 RSAD1Q9HA92 442 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 TLK1Q9UKI8 766 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 ZNF214Q9UL59 606 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 GIT1Q9Y2X7 761 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 SOWAHDA6NJG2 315 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 RNF40O75150 1001 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 RPL9P32969 192 aaKnown RBP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 GEMIN4P57678 1058 aaKnown RBP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 FMR1Q06787 632 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 CDO1Q16878 200 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 CTXN3Q4LDR2 81 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 SDCCAG8Q86SQ7 713 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 ATRIPQ8WXE1 791 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 TARS2Q9BW92 718 aaKnown RBP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 FOXP3Q9BZS1 431 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 MED4Q9NPJ6 270 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 SETD4Q9NVD3 440 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 RNF186Q9NXI6 227 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 ADAMTS1Q9UHI8 967 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 TRAF3IP3Q9Y228 551 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 TNFSF13BQ9Y275 285 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 PCDHB5Q9Y5E4 795 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 RGPD2P0DJD1 1756 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 CYB561D2O14569 222 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 ITGB3P05106 788 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 UCHL3P15374 230 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 RFC2P35250 354 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 CLCN3P51790 818 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 C1QTNF8P60827 252 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 PPP2R5DQ14738 602 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 SLC18A3Q16572 532 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 FRMD8Q9BZ67 464 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 TRPC7Q9HCX4 862 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 TRPM5Q9NZQ8 1165 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 CCDC151A5D8V7 595 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 FARP2O94887 1054 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 SLITRK3O94933 977 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 ELNP15502 786 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 NPEPPSP55786 919 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 TMEM62Q0P6H9 643 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 PSMD6Q15008 389 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 CCDC62Q6P9F0 684 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.55□□□□□ -1.041e-11■■■■□ 25.2
ATXN3-203ENST00000393287 TBKBP1A7MCY6 615 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 PAEPP09466 180 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 RARRES1P49788 294 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 MAP3K10Q02779 954 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 KLHDC7AQ5VTJ3 777 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 DDX42Q86XP3 938 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 UNC45BQ8IWX7 931 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 SLC7A14Q8TBB6 771 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 FBF1Q8TES7 1133 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 ZNF512Q96ME7 567 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 DDX20Q9UHI6 824 aaKnown RBP8.55□□□□□ -1.04
ATXN3-203ENST00000393287 RPTORQ8N122 1335 aa8.55□□□□□ -1.04
ATXN3-203ENST00000393287 AK9Q5TCS8 1911 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 TUFMP49411 452 aaKnown RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 PRKCZQ05513 592 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 NAB2Q15742 525 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 ZNF394Q53GI3 561 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 TMCO4Q5TGY1 634 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 DCLK3Q9C098 648 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms