RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 TTPALQ9BTX7 342 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 RPP25Q9BUL9 199 aaKnown RBP8.49□□□□□ -1.05
TRAV6-201ENST00000390428 CXCL16Q9H2A7 254 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 TMEM60Q9H2L4 133 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 SEMA4AQ9H3S1 761 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 PDZD7Q9H5P4 517 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 GPAMQ9HCL2 828 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 TUFT1Q9NNX1 390 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 SNTG2Q9NY99 539 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 DLGAP2Q9P1A6 1054 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 SERTAD1Q9UHV2 236 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 SIT1Q9Y3P8 196 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 ZFP37Q9Y6Q3 630 aaPredicted RBP8.49□□□□□ -1.05
TRAV6-201ENST00000390428 DMDP11532 3685 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 GVINP1Q7Z2Y8 2422 aa8.49□□□□□ -1.05
TRAV6-201ENST00000390428 ACKR2O00590 384 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 N4BP3O15049 544 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 JAK2O60674 1132 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 MED24O75448 989 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 RECQL4O94761 1208 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 LMNAP02545 664 aaKnown RBP8.48□□□□□ -1.05
TRAV6-201ENST00000390428 C8AP07357 584 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 DCNP07585 359 aaKnown RBP8.48□□□□□ -1.05
TRAV6-201ENST00000390428 HNRNPA1P09651 372 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRAV6-201ENST00000390428 MSX1P28360 303 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 HOXA9P31269 272 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 MCM7P33993 719 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 NAMPTP43490 491 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 ID4P47928 161 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 STARD6P59095 220 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 NTHL1P78549 312 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 ELAVL2Q12926 359 aaKnown RBP8.48□□□□□ -1.05
TRAV6-201ENST00000390428 PRPF4BQ13523 1007 aaKnown RBP8.48□□□□□ -1.05
TRAV6-201ENST00000390428 PSMD5Q16401 504 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 MAPK6Q16659 721 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 SPECC1Q5M775 1068 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 PPM1LQ5SGD2 360 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 LIN9Q5TKA1 542 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 DCLRE1AQ6PJP8 1040 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 PARM1Q6UWI2 310 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 ERMP1Q7Z2K6 904 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 DEPDC4Q8N2C3 294 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 BSNDQ8WZ55 320 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 FGF13Q92913 245 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 FGF14Q92915 247 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 NACC1Q96RE7 527 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 ADPGKQ9BRR6 497 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 POLR3CQ9BUI4 534 aaPredicted RBP8.48□□□□□ -1.05
TRAV6-201ENST00000390428 CCDC113Q9H0I3 377 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 C2orf40Q9H1Z8 148 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 CDH7Q9ULB5 785 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 PDCD11Q14690 1871 aaKnown RBP8.48□□□□□ -1.05
TRAV6-201ENST00000390428 OTOGLQ3ZCN5 2332 aa8.48□□□□□ -1.05
TRAV6-201ENST00000390428 COL4A3Q01955 1670 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 TMEM189-UBE2V1I3L0A0 370 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 CCL16O15467 120 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 ADAM12O43184 909 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 XYLBO75191 536 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 EDN1P05305 212 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 PRKCBP05771 671 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 GLULP15104 373 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 CYP11B2P19099 503 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 RPA1P27694 616 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 GPC5P78333 572 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 RAB33AQ14088 237 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 TRIM29Q14134 588 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 UBAP2LQ14157 1087 aaKnown RBP8.47□□□□□ -1.05
TRAV6-201ENST00000390428 EEF1DP3Q658K8 133 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 PDXDC1Q6P996 788 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 LYPD4Q6UWN0 246 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.47□□□□□ -1.05
TRAV6-201ENST00000390428 MTSS1LQ765P7 747 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 NOSTRINQ8IVI9 506 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 C1orf210Q8IVY1 113 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 ZNF295-AS1Q8N0V1 137 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 PJA1Q8NG27 643 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 DEPTORQ8TB45 409 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 SLC7A14Q8TBB6 771 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 KCNG4Q8TDN1 519 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 SHDQ96IW2 340 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 FOXQ1Q9C009 403 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 POLIQ9UNA4 740 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 USP20Q9Y2K6 914 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 GDAQ9Y2T3 454 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 R4GN57 208 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 F5P12259 2224 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 VPS13AQ96RL7 3174 aa8.47□□□□□ -1.05
TRAV6-201ENST00000390428 ARHGEF35A5YM69 484 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 A6NJY4 79 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 LRRN2O75325 713 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 B3GAT3O94766 335 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 POU2F2P09086 479 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 OR52Z1P0C646 297 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 SP9P0CG40 484 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 LIG1P18858 919 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 FGFR3P22607 806 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 IGFBP6P24592 240 aaPredicted RBP8.46□□□□□ -1.06
TRAV6-201ENST00000390428 OR1D2P34982 312 aa8.46□□□□□ -1.06
TRAV6-201ENST00000390428 RBM25P49756 843 aaKnown RBP8.46□□□□□ -1.06
TRAV6-201ENST00000390428 ST3GAL1Q11201 340 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms