RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 CEP120Q8N960 986 aa23.39■■□□□ 1.33
CNEP1R1-201ENST00000389134 SHKBP1Q8TBC3 707 aa23.39■■□□□ 1.33
CNEP1R1-201ENST00000389134 FAM200AQ8TCP9 573 aa23.39■■□□□ 1.33
CNEP1R1-201ENST00000389134 ZMAT2Q96NC0 199 aaKnown RBP23.39■■□□□ 1.33
CNEP1R1-201ENST00000389134 TMEM60Q9H2L4 133 aa23.39■■□□□ 1.33
CNEP1R1-201ENST00000389134 MYH11P35749 1972 aa23.39■■□□□ 1.33
CNEP1R1-201ENST00000389134 BTBD18B2RXH4 712 aa23.38■■□□□ 1.33
CNEP1R1-201ENST00000389134 SPECC1L-ADORA2AF8WAN1 911 aa23.38■■□□□ 1.33
CNEP1R1-201ENST00000389134 ZNF806P0C7X5 589 aa23.38■■□□□ 1.33
CNEP1R1-201ENST00000389134 CTHP32929 405 aa23.38■■□□□ 1.33
CNEP1R1-201ENST00000389134 DDX12PQ92771 950 aa23.38■■□□□ 1.33
CNEP1R1-201ENST00000389134 ACAP3Q96P50 834 aa23.38■■□□□ 1.33
CNEP1R1-201ENST00000389134 ACO2Q99798 780 aaKnown RBP23.38■■□□□ 1.33
CNEP1R1-201ENST00000389134 CDT1Q9H211 546 aa23.38■■□□□ 1.33
CNEP1R1-201ENST00000389134 TPCN1Q9ULQ1 816 aa23.38■■□□□ 1.33
CNEP1R1-201ENST00000389134 AXIN1O15169 862 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 FDPSP14324 419 aaKnown RBP23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 CPB1P15086 417 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 MUTP22033 750 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 MCM4P33991 863 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 SOX9P48436 509 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 OSTNP61366 133 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 PLD1Q13393 1074 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 ZNF568Q3ZCX4 644 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 RNF19BQ6ZMZ0 732 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 RSPRY1Q96DX4 576 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 ARRDC1-AS1Q9H2J1 176 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 PTPRHQ9HD43 1115 aa23.37■■□□□ 1.33
CNEP1R1-201ENST00000389134 MARCKSP29966 332 aaPredicted RBP23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 SF3A2Q15428 464 aaKnown RBP23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 WDR44Q5JSH3 913 aa23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 TXNDC11Q6PKC3 985 aa23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 HAUS6Q7Z4H7 955 aa23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 DIS3L2Q8IYB7 885 aaKnown RBP23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 TBC1D32Q96NH3 1257 aa23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 LRRC3Q9BY71 257 aa23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 POLD4Q9HCU8 107 aa23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 CNTN3Q9P232 1028 aa23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 YIPF1Q9Y548 306 aa23.36■■□□□ 1.33
CNEP1R1-201ENST00000389134 PHLPP2Q6ZVD8 1323 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 A0A1W2PRU2 124 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 EPHB3P54753 998 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 CCINQ13939 588 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 ARHGAP29Q52LW3 1261 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 CACNA2D4Q7Z3S7 1137 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 ARID3BQ8IVW6 561 aaPredicted RBP23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 BEST2Q8NFU1 509 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 GAB3Q8WWW8 586 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 C18orf25Q96B23 403 aaPredicted RBP23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 OXCT2Q9BYC2 517 aaPredicted RBP23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 MRPL4Q9BYD3 311 aaKnown RBP23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 TMEM134Q9H6X4 195 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 C2orf42Q9NWW7 574 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 PCDHB8Q9UN66 801 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 ZZEF1O43149 2961 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 DENND4CQ5VZ89 1909 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 NUP205Q92621 2012 aa23.35■■□□□ 1.33
CNEP1R1-201ENST00000389134 CCDC163A0A0D9SF12 145 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 DPYSL4O14531 572 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 EPN2O95208 641 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 MCF2P10911 925 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 MCM7P33993 719 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 RAP1GAPP47736 663 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 PON2Q15165 354 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 STPG1Q5TH74 334 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 TMC8Q8IU68 726 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 OBP2AQ9NY56 170 aa23.34■■□□□ 1.33
CNEP1R1-201ENST00000389134 TRIM29Q14134 588 aa23.33■■□□□ 1.33
CNEP1R1-201ENST00000389134 HAUS3Q68CZ6 603 aa23.33■■□□□ 1.33
CNEP1R1-201ENST00000389134 TCHPQ9BT92 498 aa23.33■■□□□ 1.33
CNEP1R1-201ENST00000389134 LSM14BQ9BX40 385 aaKnown RBP23.33■■□□□ 1.33
CNEP1R1-201ENST00000389134 GTSE1Q9NYZ3 720 aa23.33■■□□□ 1.33
CNEP1R1-201ENST00000389134 PCDHGA5Q9Y5G8 931 aa23.33■■□□□ 1.33
CNEP1R1-201ENST00000389134 ZFYVE26Q68DK2 2539 aa23.33■■□□□ 1.33
CNEP1R1-201ENST00000389134 ANK1P16157 1881 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 FASNP49327 2511 aaKnown RBP23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 IGF2RP11717 2491 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 CCDC169A6NNP5 214 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 RPP40O75818 363 aaKnown RBP23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 OAZ2O95190 189 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 PROS1P07225 676 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 PROZP22891 400 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 ALDH1A3P47895 512 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 PLCB2Q00722 1185 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 YWHAHQ04917 246 aaPredicted RBP23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 CCDC6Q16204 474 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 TTC8Q8TAM2 541 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 TARS2Q9BW92 718 aaKnown RBP23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 BHMT2Q9H2M3 363 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 RXFP3Q9NSD7 469 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 ASB3Q9Y575 518 aa23.32■■□□□ 1.32
CNEP1R1-201ENST00000389134 KCNK5O95279 499 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 FGF19O95750 216 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 NPTX2P47972 431 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 ANKRD1Q15327 319 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 PLA2G2CQ5R387 149 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 MPZL3Q6UWV2 235 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 GPIHBP1Q8IV16 184 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 ZFYVE19Q96K21 471 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 LRRC3BQ96PB8 259 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms