RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 NDRG2Q9UN36 371 aaKnown RBP24.73■■□□□ 1.55
VLDLR-201ENST00000382096 SMC3Q9UQE7 1217 aa24.73■■□□□ 1.55
VLDLR-201ENST00000382096 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.73■■□□□ 1.55
VLDLR-201ENST00000382096 PSMC3P17980 439 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 SMTNP53814 917 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 NRLP54845 237 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 STRN3Q13033 797 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 VITQ6UXI7 678 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 ZPBP2Q6X784 338 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 SMARCD2Q92925 531 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 SUSD3Q96L08 255 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 TCHPQ9BT92 498 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 ZNF334Q9HCZ1 680 aaPredicted RBP24.72■■□□□ 1.55
VLDLR-201ENST00000382096 CDV3Q9UKY7 258 aaKnown RBP24.72■■□□□ 1.55
VLDLR-201ENST00000382096 MAFFQ9ULX9 164 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 NUB1Q9Y5A7 615 aa24.72■■□□□ 1.55
VLDLR-201ENST00000382096 NUP210Q8TEM1 1887 aaPredicted RBP24.72■■□□□ 1.55
VLDLR-201ENST00000382096 EPHA5P54756 1037 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 RAD51AP2Q09MP3 1159 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 CTXN3Q4LDR2 81 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 ARSHQ5FYA8 562 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 CYP4A22Q5TCH4 519 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 ELMOD1Q8N336 334 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 LEMD2Q8NC56 503 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 DEPDC1BQ8WUY9 529 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 C18orf25Q96B23 403 aaPredicted RBP24.71■■□□□ 1.55
VLDLR-201ENST00000382096 CDK5RAP3Q96JB5 506 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 ZBTB45Q96K62 511 aaPredicted RBP24.71■■□□□ 1.55
VLDLR-201ENST00000382096 ZSWIM3Q96MP5 696 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 PLIN2Q99541 437 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 TRPV4Q9HBA0 871 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 AFF4Q9UHB7 1163 aaKnown RBP24.71■■□□□ 1.55
VLDLR-201ENST00000382096 GMEB2Q9UKD1 530 aa24.71■■□□□ 1.55
VLDLR-201ENST00000382096 MOSPD3O75425 235 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 GDI1P31150 447 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 MCL1Q07820 350 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 PPP2R5DQ14738 602 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 NOLC1Q14978 699 aaKnown RBP eCLIP24.7■■□□□ 1.54
VLDLR-201ENST00000382096 LARP1BQ659C4 914 aaKnown RBP24.7■■□□□ 1.54
VLDLR-201ENST00000382096 IQCEQ6IPM2 695 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 ZNF280DQ6N043 979 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 FAM3CQ92520 227 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 PARD6AQ9NPB6 346 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 CEP72Q9P209 647 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 USP18Q9UMW8 372 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 PIAS3Q9Y6X2 628 aa24.7■■□□□ 1.54
VLDLR-201ENST00000382096 BMP15O95972 392 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 CCR3P51677 355 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 NCKAP1LP55160 1127 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 SLC10A6Q3KNW5 377 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 BRAPQ7Z569 592 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 HS6ST3Q8IZP7 471 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 ZNF512Q96ME7 567 aaPredicted RBP24.69■■□□□ 1.54
VLDLR-201ENST00000382096 CNTNAP3BQ96NU0 1288 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 RTKNQ9BST9 563 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 CNTNAP3Q9BZ76 1288 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 LARSQ9P2J5 1176 aaKnown RBP24.69■■□□□ 1.54
VLDLR-201ENST00000382096 ODF2LQ9ULJ1 636 aa24.69■■□□□ 1.54
VLDLR-201ENST00000382096 NCANO14594 1321 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 H0YCG3 227 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 SCP2P22307 547 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 MCM4P33991 863 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 TWF1Q12792 350 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 LAIR1Q6GTX8 287 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 CELF5Q8N6W0 485 aaKnown RBP24.68■■□□□ 1.54
VLDLR-201ENST00000382096 APPL2Q8NEU8 664 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 LRRC15Q8TF66 581 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 DDX12PQ92771 950 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 LMAN1LQ9HAT1 526 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 ASAH2Q9NR71 780 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 ANKFY1Q9P2R3 1169 aa24.68■■□□□ 1.54
VLDLR-201ENST00000382096 ANK1P16157 1881 aa24.67■■□□□ 1.54
VLDLR-201ENST00000382096 NPHP3-ACAD11A0A0J9YXS1 232 aa24.67■■□□□ 1.54
VLDLR-201ENST00000382096 ARNTLO00327 626 aa24.67■■□□□ 1.54
VLDLR-201ENST00000382096 VIPR2P41587 438 aa24.67■■□□□ 1.54
VLDLR-201ENST00000382096 MLLT6P55198 1093 aaPredicted RBP24.67■■□□□ 1.54
VLDLR-201ENST00000382096 MFSD6LQ8IWD5 586 aa24.67■■□□□ 1.54
VLDLR-201ENST00000382096 ZSCAN18Q8TBC5 510 aaPredicted RBP24.67■■□□□ 1.54
VLDLR-201ENST00000382096 PLEKHA5Q9HAU0 1116 aa24.67■■□□□ 1.54
VLDLR-201ENST00000382096 BLOC1S4Q9NUP1 217 aa24.67■■□□□ 1.54
VLDLR-201ENST00000382096 RAB23Q9ULC3 237 aa24.67■■□□□ 1.54
VLDLR-201ENST00000382096 PCDHB8Q9UN66 801 aa24.67■■□□□ 1.54
VLDLR-201ENST00000382096 KIF26AQ9ULI4 1882 aaPredicted RBP24.66■■□□□ 1.54
VLDLR-201ENST00000382096 CHD8Q9HCK8 2581 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 CLDN3O15551 220 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 HARSP12081 509 aaKnown RBP24.66■■□□□ 1.54
VLDLR-201ENST00000382096 MYL4P12829 197 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 CPB1P15086 417 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 LONP1P36776 959 aaKnown RBP24.66■■□□□ 1.54
VLDLR-201ENST00000382096 UBA7P41226 1012 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 ZNF131P52739 623 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 CACNB1Q02641 598 aaPredicted RBP24.66■■□□□ 1.54
VLDLR-201ENST00000382096 CUL4AQ13619 759 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 RNF19BQ6ZMZ0 732 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 BEST2Q8NFU1 509 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 CALML4Q96GE6 196 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 REEP2Q9BRK0 252 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 GPR88Q9GZN0 384 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 HAPLN2Q9GZV7 340 aa24.66■■□□□ 1.54
VLDLR-201ENST00000382096 TSC2P49815 1807 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms