RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 CYP1B1Q16678 543 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 CENPUQ71F23 418 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 ZNF720Q7Z2F6 126 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 TCP10LQ8TDR4 215 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 NRG4Q8WWG1 115 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 HIC2Q96JB3 615 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 CLPTM1LQ96KA5 538 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 AMNQ9BXJ7 453 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 BCL9O00512 1426 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 GPR75-ASB3A0A0A6YYF3 556 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 MYL2P10916 166 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 AMPD1P23109 780 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 SERPINB6P35237 376 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 NT5C2P49902 561 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 EPHB1P54762 984 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 PPP4CP60510 307 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 DSG1Q02413 1049 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 MOGSQ13724 837 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 OR52E8Q6IFG1 317 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 RGS9BPQ6ZS82 235 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 FAM84AQ96KN4 292 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 NT5C1BQ96P26 610 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 PSMC3IPQ9P2W1 217 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 GRID1Q9ULK0 1009 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 ASB3Q9Y575 518 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 SMAPO00193 183 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 FSCN2O14926 492 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 SORBS3O60504 671 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 CYP11B1P15538 503 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 MTMR2Q13614 643 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 RINLQ6ZS11 566 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 SYDE1Q6ZW31 735 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 PRR11Q96HE9 360 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 PI4K2AQ9BTU6 479 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 OLFML3Q9NRN5 406 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
NPC1L1-202ENST00000381160 ROBO3Q96MS0 1386 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 I3L4J1 428 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 LPXNO60711 386 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 LYNP07948 512 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 POTEJP0CG39 1038 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 SSTR1P30872 391 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 EFTUD2Q15029 972 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■■■■□ 21.1
NPC1L1-202ENST00000381160 SIX1Q15475 284 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 SMC1BQ8NDV3 1235 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 SH3TC2Q8TF17 1288 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 C7orf43Q8WVR3 580 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 FAM111AQ96PZ2 611 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 MAK16Q9BXY0 300 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 FHDC1Q9C0D6 1143 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 LGALS13Q9UHV8 139 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 C2CD2LO14523 706 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 EIF3DO15371 548 aaKnown RBP eCLIP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 ABCD1P33897 745 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 AP2B1P63010 937 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 IRX4P78413 519 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 TMED1Q13445 227 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 RIBC1Q8N443 379 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 CCDC97Q96F63 343 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 FAM20AQ96MK3 541 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 HERPUD2Q9BSE4 406 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 RAB20Q9NX57 234 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 ACTL7BQ9Y614 415 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 KRT1P04264 644 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 PHBP35232 272 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 CCNFP41002 786 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 ALDH18A1P54886 795 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 AP1B1Q10567 949 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 XXYLT1Q8NBI6 393 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 TUBGCP5Q96RT8 1024 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 SAR1AQ9NR31 198 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 SENP1Q9P0U3 644 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 AGTPBP1Q9UPW5 1226 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 PLCH1Q4KWH8 1693 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 FRMPD4Q14CM0 1322 aa11.78□□□□□ -0.52
NPC1L1-202ENST00000381160 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 HNRNPCL1O60812 293 aaKnown RBP11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 BGNP21810 368 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 CACNB3P54284 484 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 FMO1Q01740 532 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 CNPY1Q3B7I2 92 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 GRAMD1BQ3KR37 738 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 RHPN2Q8IUC4 686 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 ARHGAP18Q8N392 663 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 ZSWIM2Q8NEG5 633 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 SLC26A7Q8TE54 656 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 ZFAND2BQ8WV99 257 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 TTC25Q96NG3 672 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 DMAP1Q9NPF5 467 aaPredicted RBP11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 SLC17A7Q9P2U7 560 aa11.77□□□□□ -0.52
NPC1L1-202ENST00000381160 FCHO1O14526 889 aa11.77□□□□□ -0.53
NPC1L1-202ENST00000381160 GZMAP12544 262 aa11.77□□□□□ -0.53
NPC1L1-202ENST00000381160 RFX1P22670 979 aa11.77□□□□□ -0.53
NPC1L1-202ENST00000381160 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms