RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SNRPAP09012 282 aaKnown RBP16.83■□□□□ 0.28
COL2A1-202ENST00000380518 SPRP35270 261 aaPredicted RBP16.83■□□□□ 0.28
COL2A1-202ENST00000380518 PTK7Q13308 1070 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 LAMB3Q13751 1172 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 FLOT2Q14254 428 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 ATPAF2Q8N5M1 289 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 EFHBQ8N7U6 833 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 DAGLBQ8NCG7 672 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 SCFD2Q8WU76 684 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 PTPRN2Q92932 1015 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 GPR75-ASB3A0A0A6YYF3 556 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 TMEM120BA0PK00 339 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 KDELC2Q7Z4H8 507 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 SEC16BQ96JE7 1060 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 IL25Q9H293 177 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 EXTL3O43909 919 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 CST8O60676 142 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 ACADSBP45954 432 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 KLK7P49862 253 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 C3orf62Q6ZUJ4 267 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 PRMT7Q9NVM4 692 aaPredicted RBP16.82■□□□□ 0.28
COL2A1-202ENST00000380518 ARHGEF38Q9NXL2 777 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.82■□□□□ 0.28
COL2A1-202ENST00000380518 TSR3Q9UJK0 312 aaKnown RBP16.82■□□□□ 0.28
COL2A1-202ENST00000380518 AURKCQ9UQB9 309 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 GH1P01241 217 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 DDX5P17844 614 aaKnown RBP16.82■□□□□ 0.28
COL2A1-202ENST00000380518 HMOX2P30519 316 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 PDK1Q15118 436 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 NYAP1Q6ZVC0 841 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 HNRNPLLQ8WVV9 542 aaKnown RBP16.82■□□□□ 0.28
COL2A1-202ENST00000380518 PPP1R2P1Q96PQ5 205 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 FAM129AQ9BZQ8 928 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 CNOT7Q9UIV1 285 aaKnown RBP16.82■□□□□ 0.28
COL2A1-202ENST00000380518 GTF3C4Q9UKN8 822 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 UNC13BO14795 1591 aa16.82■□□□□ 0.28
COL2A1-202ENST00000380518 TNPO2O14787 897 aaKnown RBP16.81■□□□□ 0.28
COL2A1-202ENST00000380518 TLR2O60603 784 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 GRIN1Q05586 938 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 ATF7IP2Q5U623 682 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 ERP27Q96DN0 273 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 CYFIP2Q96F07 1278 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 ELP3Q9H9T3 547 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 PCMTD2Q9NV79 361 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 WEE2P0C1S8 567 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 GPAT2Q6NUI2 795 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 TRPM8Q7Z2W7 1104 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 PRUNE1Q86TP1 453 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 CATSPER3Q86XQ3 398 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 EHD2Q9NZN4 543 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 EEF2KO00418 725 aaKnown RBP16.81■□□□□ 0.28
COL2A1-202ENST00000380518 KCNJ1P48048 391 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 IRAK1P51617 712 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 ITGA8P53708 1063 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 PDAP1Q13442 181 aaKnown RBP16.81■□□□□ 0.28
COL2A1-202ENST00000380518 COBLL1Q53SF7 1204 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 C4orf22Q6V702 233 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 DDX42Q86XP3 938 aaKnown RBP eCLIP16.81■□□□□ 0.28
COL2A1-202ENST00000380518 MRPL1Q9BYD6 325 aaKnown RBP16.81■□□□□ 0.28
COL2A1-202ENST00000380518 NSMCE4AQ9NXX6 385 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 SETBP1Q9Y6X0 1596 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 IQCA1LA6NCM1 817 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 KLHL2O95198 593 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 PYGLP06737 847 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 PDGFRBP09619 1106 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 CNGA3Q16281 694 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 RRM2BQ7LG56 351 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 RDM1Q8NG50 284 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 FEZF2Q8TBJ5 459 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 DCUN1D1Q96GG9 259 aa16.81■□□□□ 0.28
COL2A1-202ENST00000380518 FRMD8Q9BZ67 464 aaPredicted RBP16.81■□□□□ 0.28
COL2A1-202ENST00000380518 CELF4Q9BZC1 486 aaKnown RBP16.81■□□□□ 0.28
COL2A1-202ENST00000380518 MARCOQ9UEW3 520 aaPredicted RBP16.81■□□□□ 0.28
COL2A1-202ENST00000380518 MTO1Q9Y2Z2 717 aaKnown RBP16.81■□□□□ 0.28
COL2A1-202ENST00000380518 ZC3H12BQ5HYM0 836 aaKnown RBP16.8■□□□□ 0.28
COL2A1-202ENST00000380518 IER5Q5VY09 327 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 KCNH7Q9NS40 1196 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 PSD3Q9NYI0 1048 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.8■□□□□ 0.28
COL2A1-202ENST00000380518 MADDQ8WXG6 1647 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 LONP2Q86WA8 852 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 KATNAL1Q9BW62 490 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 TASP1Q9H6P5 420 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 C17orf75Q9HAS0 396 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 SUFUQ9UMX1 484 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 DYNC1LI2O43237 492 aaPredicted RBP16.8■□□□□ 0.28
COL2A1-202ENST00000380518 POLBP06746 335 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 HIST1H2AGP0C0S8 130 aaPredicted RBP16.8■□□□□ 0.28
COL2A1-202ENST00000380518 HIST1H2ADP20671 130 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 DTX3LQ8TDB6 740 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 HIST1H2AHQ96KK5 128 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 SPATA17Q96L03 361 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 HIST1H2AJQ99878 128 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 H2AFJQ9BTM1 129 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 ADGRB3O60242 1522 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 QRICH2Q9H0J4 1663 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 ATMINO43313 823 aaPredicted RBP16.8■□□□□ 0.28
COL2A1-202ENST00000380518 GPD1P21695 349 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 PPP4CP60510 307 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 MED21Q13503 144 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms