RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 PPFIA2O75334 1257 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 ERLIN2O94905 339 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 KRT19P08727 400 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 RPL7AP62424 266 aaKnown RBP20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 DUOXA2Q1HG44 320 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 KRT71Q3SY84 523 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 KDM7AQ6ZMT4 941 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 EFCAB13Q8IY85 973 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 TRIM11Q96F44 468 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 CISHQ9NSE2 258 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 NXF1Q9UBU9 619 aaKnown RBP20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 SMIM23A6NLE4 172 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 HMGB1P1B2RPK0 211 aaPredicted RBP20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 TMEM191BP0C7N4 346 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 POTEJP0CG39 1038 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 PMS2P54278 862 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 MCL1Q07820 350 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 ODF2Q5BJF6 829 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 KCNV1Q6PIU1 500 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 FASTKD5Q7L8L6 764 aaKnown RBP20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 C1orf131Q8NDD1 294 aaKnown RBP20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 NOVA2Q9UNW9 492 aaKnown RBP20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 PODXLO00592 558 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 PROSCO94903 275 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 CXCL8P10145 99 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 RAP1GAPP47736 663 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 CCT5P48643 541 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 ORC1Q13415 861 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 ATP13A4Q4VNC1 1196 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 ARMCX2Q7L311 632 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 CCDC25Q86WR0 208 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 DDX27Q96GQ7 796 aaKnown RBP20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 TXLNGYQ9BZA5 131 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 SMARCAD1Q9H4L7 1026 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 POLIQ9UNA4 740 aa20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 R3HDM2Q9Y2K5 976 aaKnown RBP20.47■□□□□ 0.87
PCDHA4-201ENST00000378125 FSCN2O14926 492 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 PPFIA4O75335 1185 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 ECEL1O95672 775 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 HOXC6P09630 235 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 TCF4P15884 667 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 FGFR4P22455 802 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 PTP4A2Q12974 167 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 TTLL4Q14679 1199 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 CYP1B1Q16678 543 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 ZFYVE27Q5T4F4 411 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 MPZL3Q6UWV2 235 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 EPB41L4BQ9H329 900 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 SEMA4AQ9H3S1 761 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 EVPLQ92817 2033 aa20.46■□□□□ 0.87
PCDHA4-201ENST00000378125 RALAP11233 206 aa20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 VPS41P49754 854 aa20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 KRT17Q04695 432 aa20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 ZNF699Q32M78 642 aa20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 DPY19L2Q6NUT2 758 aa20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 ANKS1BQ7Z6G8 1248 aa20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 UPF1Q92900 1129 aaKnown RBP eCLIP20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 RNF25Q96BH1 459 aaPredicted RBP20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 PLVAPQ9BX97 442 aa20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 MROH8Q9H579 483 aa20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 CNTN6Q9UQ52 1028 aa20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.45■□□□□ 0.87
PCDHA4-201ENST00000378125 TLDC2A0PJX2 215 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 PI4K2BG5E9Z4 385 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 ACKR2O00590 384 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 TMOD1P28289 359 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 SLC1A1P43005 524 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 TRIM72Q6ZMU5 477 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 CCDC114Q96M63 670 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 SYT17Q9BSW7 474 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 C2orf40Q9H1Z8 148 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 PASKQ96RG2 1323 aa20.45■□□□□ 0.86
PCDHA4-201ENST00000378125 ZNF286BP0CG31 522 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 INSRRP14616 1297 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 ZNF132P52740 706 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 DRG2P55039 364 aaKnown RBP20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 MBTD1Q05BQ5 628 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 PDE4CQ08493 712 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 SGSM1Q2NKQ1 1148 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 CYP4A22Q5TCH4 519 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 TSHZ1Q6ZSZ6 1077 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 ARMC9Q7Z3E5 817 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 PHF13Q86YI8 300 aaPredicted RBP20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 UBR7Q8N806 425 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 TFAP2BQ92481 460 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 CPB2Q96IY4 423 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 NIF3L1Q9GZT8 377 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 LRRC19Q9H756 370 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 MRPL47Q9HD33 250 aaKnown RBP20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 CDH8P55286 799 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 MAGOHP61326 146 aaKnown RBP20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 TFDP1Q14186 410 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 SLC29A2Q14542 456 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 PLEKHA7Q6IQ23 1121 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 RUFY4Q6ZNE9 571 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 ACSF2Q96CM8 615 aaPredicted RBP20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 CDT1Q9H211 546 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 FZD8Q9H461 694 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 PTPRHQ9HD43 1115 aa20.44■□□□□ 0.86
PCDHA4-201ENST00000378125 DNAJC17Q9NVM6 304 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms