RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 PDLIM2Q96JY6 352 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 NUP58Q9BVL2 599 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 RAB20Q9NX57 234 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 DPP3Q9NY33 737 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 ITGA11Q9UKX5 1188 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 INPP5FQ9Y2H2 1132 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 R3HCC1Q9Y3T6 440 aaKnown RBP18.85■□□□□ 0.61
PFDN6-201ENST00000374606 INSL6Q9Y581 213 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.85■□□□□ 0.61
PFDN6-201ENST00000374606 GRXCR2A6NFK2 248 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 INPPL1O15357 1258 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 HOXA2O43364 376 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 VNN1O95497 513 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 ITGB3P05106 788 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 KRT19P08727 400 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 TPM1P09493 284 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 FGFR1P11362 822 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 GRIK3Q13003 919 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 ZBTB6Q15916 424 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 PTPROQ16827 1216 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 TIGD5Q53EQ6 642 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 PPFIBP1Q86W92 1011 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 ABI1Q8IZP0 508 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 EHBP1Q8NDI1 1231 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 URGCPQ8TCY9 931 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 HELQQ8TDG4 1101 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 SEMA4DQ92854 862 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 C18orf25Q96B23 403 aaPredicted RBP18.84■□□□□ 0.61
PFDN6-201ENST00000374606 MRPL38Q96DV4 380 aaKnown RBP18.84■□□□□ 0.61
PFDN6-201ENST00000374606 PPP1R10Q96QC0 940 aaKnown RBP18.84■□□□□ 0.61
PFDN6-201ENST00000374606 C17orf80Q9BSJ5 609 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 PLCB1Q9NQ66 1216 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 RNF19AQ9NV58 838 aa18.84■□□□□ 0.61
PFDN6-201ENST00000374606 TTC3P53804 2025 aa18.83■□□□□ 0.61
PFDN6-201ENST00000374606 ZC3H11AO75152 810 aaKnown RBP eCLIP18.83■□□□□ 0.62e-7■■■□□ 16.9
PFDN6-201ENST00000374606 OFD1O75665 1012 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 AMHP03971 560 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 THP07101 528 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 CYP3A5P20815 502 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 GUCY2FP51841 1108 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 FIGNQ5HY92 759 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 WDR44Q5JSH3 913 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 CLLU1OSQ5K130 101 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.83■□□□□ 0.6
PFDN6-201ENST00000374606 GSTCDQ8NEC7 633 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 LMO3Q8TAP4 145 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 SAMD11Q96NU1 681 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 NT5C1BQ96P26 610 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 SIX2Q9NPC8 291 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 IMPACTQ9P2X3 320 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 APEX2Q9UBZ4 518 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 PLAGL2Q9UPG8 496 aa18.83■□□□□ 0.6
PFDN6-201ENST00000374606 DCXO43602 365 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 POMCP01189 267 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 GYPCP04921 128 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 RFX1P22670 979 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 POLR2BP30876 1174 aaKnown RBP18.82■□□□□ 0.6
PFDN6-201ENST00000374606 AFF1P51825 1210 aaKnown RBP18.82■□□□□ 0.6
PFDN6-201ENST00000374606 RBP5P82980 135 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 LRMPQ12912 555 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 KLHDC7AQ5VTJ3 777 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 RSPH1Q8WYR4 309 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 PI4K2AQ9BTU6 479 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 GANQ9H2C0 597 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 SIX4Q9UIU6 781 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 FAM50BQ9Y247 325 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 DAAM1Q9Y4D1 1078 aa18.82■□□□□ 0.6
PFDN6-201ENST00000374606 H3BQ06 376 aaPredicted RBP18.81■□□□□ 0.6
PFDN6-201ENST00000374606 EPHB6O15197 1021 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 ASS1P00966 412 aaKnown RBP18.81■□□□□ 0.6
PFDN6-201ENST00000374606 PTMAP06454 111 aaKnown RBP18.81■□□□□ 0.6
PFDN6-201ENST00000374606 MYL6P60660 151 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 POLR2FP61218 127 aaKnown RBP18.81■□□□□ 0.6
PFDN6-201ENST00000374606 NOP14P78316 857 aaKnown RBP18.81■□□□□ 0.6
PFDN6-201ENST00000374606 HTRA4P83105 476 aaPredicted RBP18.81■□□□□ 0.6
PFDN6-201ENST00000374606 APBA1Q02410 837 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 SOX4Q06945 474 aaPredicted RBP18.81■□□□□ 0.6
PFDN6-201ENST00000374606 TBX2Q13207 712 aaPredicted RBP18.81■□□□□ 0.6
PFDN6-201ENST00000374606 SGSM1Q2NKQ1 1148 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 ZNF699Q32M78 642 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 NOMO2Q5JPE7 1267 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 CACNA2D4Q7Z3S7 1137 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 SP7Q8TDD2 431 aaPredicted RBP18.81■□□□□ 0.6
PFDN6-201ENST00000374606 TAF4BQ92750 862 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 PPP1R9BQ96SB3 815 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 TTYH3Q9C0H2 523 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 KCNH6Q9H252 994 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 GOLGA2P5Q9HBQ8 144 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.81■□□□□ 0.61e-20■■■■■ 215.3
PFDN6-201ENST00000374606 MIOSQ9NXC5 875 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 CEP72Q9P209 647 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 KANSL3Q9P2N6 904 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 AGAP1Q9UPQ3 857 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 FHOD1Q9Y613 1164 aa18.81■□□□□ 0.6
PFDN6-201ENST00000374606 LRRN2O75325 713 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 CST3P01034 146 aaPredicted RBP18.8■□□□□ 0.6
PFDN6-201ENST00000374606 UCHL3P15374 230 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 LRPAP1P30533 357 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 ATICP31939 592 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 NHLH1Q02575 133 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms