RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 CAMKK1Q8N5S9 505 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 PSPC1Q8WXF1 523 aaKnown RBP13.6□□□□□ -0.23
HDAC8-204ENST00000373560 SLC5A5Q92911 643 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 TMEM209Q96SK2 561 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 EVLQ9UI08 416 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-204ENST00000373560 BACE2Q9Y5Z0 518 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 COL5A1P20908 1838 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-204ENST00000373560 A0A1W2PRU2 124 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 SFNP31947 248 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 CIITAP33076 1130 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 DGKEP52429 567 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 MBTD1Q05BQ5 628 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 TWF1Q12792 350 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 ZNF423Q2M1K9 1284 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 LRCH2Q5VUJ6 765 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 MIER3Q7Z3K6 550 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 PACS2Q86VP3 889 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 TMC8Q8IU68 726 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 FANCBQ8NB91 859 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 RPLP0P6Q8NHW5 317 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 ZNF461Q8TAF7 563 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 PIP4K2CQ8TBX8 421 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 CCDC51Q96ER9 411 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 TEKT3Q9BXF9 490 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 LRRC3Q9BY71 257 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 TRIM6Q9C030 488 aaPredicted RBP13.59□□□□□ -0.23
HDAC8-204ENST00000373560 DHX33Q9H6R0 707 aaKnown RBP13.59□□□□□ -0.23
HDAC8-204ENST00000373560 BARHL2Q9NY43 387 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 RABGEF1Q9UJ41 708 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 RCAN3Q9UKA8 241 aa13.59□□□□□ -0.23
HDAC8-204ENST00000373560 CCDC69A6NI79 296 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 UPK3BL1B0FP48 263 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 UPK3BL2E5RIL1 263 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 PSMD10O75832 226 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 FTH1P19P0C7X4 201 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 CD59P13987 128 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 CYP4A22Q5TCH4 519 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 SLC8B1Q6J4K2 584 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 PDXDC1Q6P996 788 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 PADI6Q6TGC4 694 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 FERMT3Q86UX7 667 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 ARID3BQ8IVW6 561 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-204ENST00000373560 TCEAL8Q8IYN2 117 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 FRMD1Q8N878 549 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 ADAMTS14Q8WXS8 1223 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 POLR3CQ9BUI4 534 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-204ENST00000373560 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 HPS4Q9NQG7 708 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-204ENST00000373560 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.24
HDAC8-204ENST00000373560 GOLGA8CPA6NN73 597 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 INO80B-WBP1J3KQ70 363 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 APBB3O95704 486 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 ATF2P15336 505 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 AXLP30530 894 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 PTGER3P43115 390 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 PTENP60484 403 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
HDAC8-204ENST00000373560 DMC1Q14565 340 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 PCSK4Q6UW60 755 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 ASAP3Q8TDY4 903 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 RIT2Q99578 217 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 GTPBP2Q9BX10 602 aaKnown RBP13.57□□□□□ -0.24
HDAC8-204ENST00000373560 SMG9Q9H0W8 520 aaKnown RBP13.57□□□□□ -0.24
HDAC8-204ENST00000373560 ASAH2Q9NR71 780 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
HDAC8-204ENST00000373560 CEP192Q8TEP8 1941 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 A0A087WV48 116 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 EML1O00423 815 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 VNN2O95498 520 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 ITPKBP27987 946 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 ELF1P32519 619 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 LMAN2Q12907 356 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 CAPSQ13938 189 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 EMC2Q15006 297 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 ARHGAP29Q52LW3 1261 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 TRIM68Q6AZZ1 485 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 XPNPEP1Q9NQW7 623 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 PLXND1Q9Y4D7 1925 aa13.56□□□□□ -0.24
HDAC8-204ENST00000373560 ATMQ13315 3056 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 TMEM189-UBE2V1I3L0A0 370 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 TBX3O15119 743 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 ATG13O75143 517 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 RECQL4O94761 1208 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 B3GAT3O94766 335 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 CLCNKBP51801 687 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 SRSF1Q07955 248 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDAC8-204ENST00000373560 CYP4F3Q08477 520 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 GRSF1Q12849 480 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDAC8-204ENST00000373560 MMRN1Q13201 1228 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 ITPRIPL2Q3MIP1 535 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 SLC27A1Q6PCB7 646 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 CASC1Q6TDU7 716 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 ANKS3Q6ZW76 656 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 SYT13Q7L8C5 426 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 SLCO6A1Q86UG4 719 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms