RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 PCDHB6Q9Y5E3 794 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 PIAS3Q9Y6X2 628 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 PP2D1A8MPX8 630 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 ARNTLO00327 626 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 CHRNB1P11230 501 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 MYL4P12829 197 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 PLS3P13797 630 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 CDC25AP30304 524 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 LRPAP1P30533 357 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 PRPHP41219 470 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 CCR3P51677 355 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 SMTNP53814 917 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 MCL1Q07820 350 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 NOLC1Q14978 699 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 IL17AQ16552 155 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 ZPBP2Q6X784 338 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 KCNK18Q7Z418 384 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 FAM184AQ8NB25 1140 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 TMEM161BQ8NDZ6 487 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 ZSCAN18Q8TBC5 510 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 MMTAG2Q9BU76 263 aaKnown RBP14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 LRRC3Q9BY71 257 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 GMEB2Q9UKD1 530 aa14.27□□□□□ -0.13
TRAPPC3-201ENST00000373159 HEPACAM2A8MVW5 462 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 CLDN3O15551 220 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 CLTAP09496 248 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 MAPTP10636 758 aaKnown RBP14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 CPB1P15086 417 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 GJA1P17302 382 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 CYP3A5P20815 502 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 CXCL12P48061 93 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 YWHAHQ04917 246 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 GPR17Q13304 367 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 TEAD2Q15562 447 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 ZBTB6Q15916 424 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 SEZ6Q53EL9 994 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 C1orf228Q6PIY5 440 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 DTHD1Q6ZMT9 781 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 SHKBP1Q8TBC3 707 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 MSANTD3Q96H12 275 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 RTKNQ9BST9 563 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 SH2B1Q9NRF2 756 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 ANKFY1Q9P2R3 1169 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 TUBGCP4Q9UGJ1 667 aa14.26□□□□□ -0.13
TRAPPC3-201ENST00000373159 PATJQ8NI35 1801 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 TTC26A0AVF1 554 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 OR6C75A6NL08 312 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 CHADO15335 359 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 SEC24BO95487 1268 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 VNN2O95498 520 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 CCNE1P24864 410 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 AARSP49588 968 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 FCHO2Q0JRZ9 810 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 PLD1Q13393 1074 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 HYIQ5T013 277 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 LAIR1Q6GTX8 287 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 SPEM1Q8N4L4 309 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 SYT2Q8N9I0 419 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 KCNN1Q92952 543 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 TSPAN18Q96SJ8 248 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 C8orf33Q9H7E9 229 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 PARD6AQ9NPB6 346 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 KCND2Q9NZV8 630 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 CDV3Q9UKY7 258 aaKnown RBP14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 RAB23Q9ULC3 237 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 USP18Q9UMW8 372 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 UBQLN1Q9UMX0 589 aaKnown RBP14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 YIPF1Q9Y548 306 aa14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 TIMM13Q9Y5L4 95 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC3-201ENST00000373159 NCANO14594 1321 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 LRP3O75074 770 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 PAPSS2O95340 614 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 RETP07949 1114 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 CXCL8P10145 99 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 TYMPP19971 482 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 EPHB3P54753 998 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 DUSP4Q13115 394 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 GAS6Q14393 721 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 KYAT1Q16773 422 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 CENPPQ6IPU0 288 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 USP37Q86T82 979 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 TMC8Q8IU68 726 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 YAF2Q8IY57 180 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 CSGALNACT1Q8TDX6 532 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 RSPRY1Q96DX4 576 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 KIF12Q96FN5 646 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 PNMA5Q96PV4 448 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 HAPLN2Q9GZV7 340 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 DNAJC25Q9H1X3 360 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 SLITRK6Q9H5Y7 841 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 ASB3Q9Y575 518 aa14.24□□□□□ -0.13
TRAPPC3-201ENST00000373159 CNOT1A5YKK6 2376 aaKnown RBP14.23□□□□□ -0.13
TRAPPC3-201ENST00000373159 A0A1W2PRU2 124 aa14.23□□□□□ -0.13
TRAPPC3-201ENST00000373159 H0YCG3 227 aa14.23□□□□□ -0.13
TRAPPC3-201ENST00000373159 ADRB2P07550 413 aa14.23□□□□□ -0.13
TRAPPC3-201ENST00000373159 CNR2P34972 360 aa14.23□□□□□ -0.13
TRAPPC3-201ENST00000373159 ALDH1A3P47895 512 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms