RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 HVCN1Q96D96 273 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 ADARB2Q9NS39 739 aaKnown RBP12.49□□□□□ -0.41
PDE6C-201ENST00000371447 UVRAGQ9P2Y5 699 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 CTNNAL1Q9UBT7 734 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 KIAA1217Q5T5P2 1943 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 A0A087WZ62 844 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 H0YCG3 227 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 RGS16O15492 202 aaPredicted RBP12.49□□□□□ -0.41
PDE6C-201ENST00000371447 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
PDE6C-201ENST00000371447 PLCB4Q15147 1175 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 ZNF365Q70YC5 407 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 TFAP2BQ92481 460 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 GPR20Q99678 358 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 FDXACB1Q9BRP7 624 aaPredicted RBP12.49□□□□□ -0.41
PDE6C-201ENST00000371447 ZNF148Q9UQR1 794 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
PDE6C-201ENST00000371447 PASKQ96RG2 1323 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 TOM1L1O75674 476 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 IQCF3P0C7M6 154 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 PTGIRP43119 386 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 IFT88Q13099 833 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 MAMLD1Q13495 774 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 ATF7IP2Q5U623 682 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 EP400NLQ6ZTU2 488 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 ABRAQ8N0Z2 381 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 RPS6KC1Q96S38 1066 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 CGRRF1Q99675 332 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 KIAA1586Q9HCI6 787 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 KCNK9Q9NPC2 374 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 GRHL1Q9NZI5 618 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 KRT1P04264 644 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 ACO1P21399 889 aaKnown RBP12.48□□□□□ -0.41
PDE6C-201ENST00000371447 MDH1P40925 334 aaKnown RBP12.48□□□□□ -0.41
PDE6C-201ENST00000371447 SNRPFP62306 86 aaKnown RBP12.48□□□□□ -0.41
PDE6C-201ENST00000371447 DUOXA2Q1HG44 320 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 DNAJC24Q6P3W2 148 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 RUFY4Q6ZNE9 571 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 ERO1BQ86YB8 467 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 ANKRD13AQ8IZ07 590 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 UBA3Q8TBC4 463 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 AFG1LQ8WV93 481 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 NLRP7Q8WX94 980 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 IVNS1ABPQ9Y6Y0 642 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 MYH9P35579 1960 aaKnown RBP12.48□□□□□ -0.41
PDE6C-201ENST00000371447 HMGB1P1B2RPK0 211 aaPredicted RBP12.48□□□□□ -0.41
PDE6C-201ENST00000371447 H0YGN5 161 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 MAPK13O15264 365 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 MSCO60682 206 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 NFICP08651 508 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 INSRRP14616 1297 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 CTNNA2P26232 953 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 ADCYAP1R1P41586 468 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 NOMO3P69849 1222 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 AMHR2Q16671 573 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 CDO1Q16878 200 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 EFCAB13Q8IY85 973 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 CCDC33Q8N5R6 958 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 RUBCNQ92622 972 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 SLC10A4Q96EP9 437 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 PAIP2Q9BPZ3 127 aaKnown RBP12.48□□□□□ -0.41
PDE6C-201ENST00000371447 PLVAPQ9BX97 442 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 ZDHHC18Q9NUE0 388 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 GGT7Q9UJ14 662 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.48□□□□□ -0.41
PDE6C-201ENST00000371447 NFS1Q9Y697 457 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 FAM169AQ9Y6X4 670 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 CNTNAP2Q9UHC6 1331 aa12.48□□□□□ -0.41
PDE6C-201ENST00000371447 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
PDE6C-201ENST00000371447 ITGB3P05106 788 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 ITGA8P53708 1063 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 BPIFB4P59827 614 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 MTMR3Q13615 1198 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 GLRA4Q5JXX5 417 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 GLIS1Q8NBF1 620 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.47□□□□□ -0.41
PDE6C-201ENST00000371447 CD101Q93033 1021 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 HMGXB4Q9UGU5 601 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 HES2Q9Y543 173 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 LDHAP00338 332 aaKnown RBP12.47□□□□□ -0.41
PDE6C-201ENST00000371447 CREB1P16220 341 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 NRLP54845 237 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 DHX34Q14147 1143 aaKnown RBP12.47□□□□□ -0.41
PDE6C-201ENST00000371447 CELF3Q5SZQ8 465 aaKnown RBP12.47□□□□□ -0.41
PDE6C-201ENST00000371447 CPLX4Q7Z7G2 160 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 ERICH1Q86X53 443 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 CCT8L2Q96SF2 557 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 ACO2Q99798 780 aaKnown RBP12.47□□□□□ -0.41
PDE6C-201ENST00000371447 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 OSBPL8Q9BZF1 889 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 AGTPBP1Q9UPW5 1226 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.47□□□□□ -0.41
PDE6C-201ENST00000371447 ATAD5Q96QE3 1844 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 STAM2O75886 525 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 TNNC2P02585 160 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 ATF2P15336 505 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 PRAMEF19Q5SWL8 479 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 DENND1BQ6P3S1 775 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 C15orf39Q6ZRI6 1047 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 SESTD1Q86VW0 696 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms