RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 HES2Q9Y543 173 aa18.74■□□□□ 0.59
SSBP3-203ENST00000371319 FRMPD3Q5JV73 1810 aa18.74■□□□□ 0.59
SSBP3-203ENST00000371319 BUB1BO60566 1050 aaPredicted RBP18.73■□□□□ 0.59
SSBP3-203ENST00000371319 MGAT3Q09327 533 aa18.73■□□□□ 0.59
SSBP3-203ENST00000371319 ZBTB6Q15916 424 aa18.73■□□□□ 0.59
SSBP3-203ENST00000371319 ZNF572Q7Z3I7 529 aaPredicted RBP18.73■□□□□ 0.59
SSBP3-203ENST00000371319 SYCE1Q8N0S2 351 aa18.73■□□□□ 0.59
SSBP3-203ENST00000371319 RABGGTAQ92696 567 aa18.73■□□□□ 0.59
SSBP3-203ENST00000371319 AGAP1Q9UPQ3 857 aa18.73■□□□□ 0.59
SSBP3-203ENST00000371319 ATMINO43313 823 aaPredicted RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 THAP12O43422 761 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 RECQL4O94761 1208 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 MTA2O94776 668 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 KIF4AO95239 1232 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 STAU1O95793 577 aaKnown RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 CXCR5P32302 372 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 RAP1GAPP47736 663 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 YARSP54577 528 aaKnown RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 YWHAEP62258 255 aaKnown RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 RBP5P82980 135 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 HTRA3P83110 453 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 TRIM72Q6ZMU5 477 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 RPAINQ86UA6 219 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 RSPH3Q86UC2 560 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 NT5DC3Q86UY8 548 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 PCSK9Q8NBP7 692 aaKnown RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 ZNF653Q96CK0 615 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 CYFIP2Q96F07 1278 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 CALR3Q96L12 384 aaKnown RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 PSMB7Q99436 277 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 SENP6Q9GZR1 1112 aaPredicted RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 CNTN3Q9P232 1028 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 CTTNBP2NLQ9P2B4 639 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 GTF3C4Q9UKN8 822 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 M0QZ92 97 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 CHRNA1P02708 482 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 MYCNP04198 464 aaPredicted RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 ZSCAN20P17040 1043 aaPredicted RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 NOMO3P69849 1222 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 CENPCQ03188 943 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 RPS6KA1Q15418 735 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 WDR72Q3MJ13 1102 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 NAA35Q5VZE5 725 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 DAAM2Q86T65 1068 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 MCOLN2Q8IZK6 566 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 CAGE1Q8TC20 777 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 ZNF606Q8WXB4 792 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 CPA5Q8WXQ8 436 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 HPDLQ96IR7 371 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 ZSWIM1Q9BR11 485 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 TRIM6Q9C030 488 aaPredicted RBP18.72■□□□□ 0.59
SSBP3-203ENST00000371319 SMYD3Q9H7B4 428 aa18.72■□□□□ 0.59
SSBP3-203ENST00000371319 FKTNO75072 461 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 AKAP5P24588 427 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 SSTR3P32745 418 aaPredicted RBP18.71■□□□□ 0.59
SSBP3-203ENST00000371319 CDH8P55286 799 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 RBM10P98175 930 aaKnown RBP18.71■□□□□ 0.59
SSBP3-203ENST00000371319 PTPROQ16827 1216 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 XKR4Q5GH76 650 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 C11orf63Q6NUN7 778 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 PEX26Q7Z412 305 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 NOA1Q8NC60 698 aaKnown RBP18.71■□□□□ 0.59
SSBP3-203ENST00000371319 SMG8Q8ND04 991 aaKnown RBP18.71■□□□□ 0.59
SSBP3-203ENST00000371319 APOL6Q9BWW8 343 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 EPC1Q9H2F5 836 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 CYP3A43Q9HB55 503 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 TUBGCP4Q9UGJ1 667 aa18.71■□□□□ 0.59
SSBP3-203ENST00000371319 CHORDC1Q9UHD1 332 aaPredicted RBP18.71■□□□□ 0.59
SSBP3-203ENST00000371319 INHAP05111 366 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 BRD2P25440 801 aaKnown RBP18.7■□□□□ 0.58
SSBP3-203ENST00000371319 DNA2P51530 1060 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 ZNF394Q53GI3 561 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 MON1BQ7L1V2 547 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 PASD1Q8IV76 773 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 WHAMMQ8TF30 809 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 TFAP2BQ92481 460 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 C18orf25Q96B23 403 aaPredicted RBP18.7■□□□□ 0.58
SSBP3-203ENST00000371319 HES6Q96HZ4 224 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 NUP85Q9BW27 656 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 PDCL3Q9H2J4 239 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 SMARCAL1Q9NZC9 954 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 EHD2Q9NZN4 543 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 CNOT8Q9UFF9 292 aaKnown RBP18.7■□□□□ 0.58
SSBP3-203ENST00000371319 AMFRQ9UKV5 643 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 IPPQ9Y573 584 aa18.7■□□□□ 0.58
SSBP3-203ENST00000371319 CES2O00748 559 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 CABYRO75952 493 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 RPLP2P05387 115 aaKnown RBP18.69■□□□□ 0.58
SSBP3-203ENST00000371319 CTSHP09668 335 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 ACLYP53396 1101 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 TUBB4BP68371 445 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 PTGISQ16647 500 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 RNF180Q86T96 592 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
SSBP3-203ENST00000371319 BEST2Q8NFU1 509 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 ZNF296Q8WUU4 475 aaPredicted RBP18.69■□□□□ 0.58
SSBP3-203ENST00000371319 MS4A14Q96JA4 679 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 RPGRIP1Q96KN7 1286 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 AVENQ9NQS1 362 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms