RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 HES2Q9Y543 173 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 INSL5Q9Y5Q6 135 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 TSC2P49815 1807 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 IFIT3O14879 490 aaKnown RBP11.5□□□□□ -0.57
TUBE1-201ENST00000368657 CBFA2T3O75081 653 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 GJB3O75712 270 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 ERLIN2O94905 339 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 DKK1O94907 266 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 KIF4AO95239 1232 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 SREBF1P36956 1147 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 GNAQP50148 359 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 GALK1P51570 392 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 RIPPLY3P57055 190 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 NMIQ13287 307 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-201ENST00000368657 RUNX3Q13761 415 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 MTERF2Q49AM1 385 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 XKR3Q5GH77 459 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 TPGS2Q68CL5 300 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 CYB5R4Q7L1T6 521 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 FMNL3Q8IVF7 1028 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 CTCFLQ8NI51 663 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-201ENST00000368657 TRIM6Q9C030 488 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-201ENST00000368657 DISC1Q9NRI5 854 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 SRPK3Q9UPE1 567 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 COL4A3BPQ9Y5P4 624 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 ADAMTS9Q9P2N4 1935 aa11.5□□□□□ -0.57
TUBE1-201ENST00000368657 PTPRQQ9UMZ3 2332 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 TRAPPC3O43617 180 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 MX1P20591 662 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 ITPKAP23677 461 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 WEE1P30291 646 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 P2RY2P41231 377 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 ROR1Q01973 937 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 ARMCX6Q7L4S7 300 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 EXOC8Q8IYI6 725 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 SHKBP1Q8TBC3 707 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 FNBP1Q96RU3 617 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 ANO3Q9BYT9 981 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 MINDY3Q9H8M7 445 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 FSCN3Q9NQT6 498 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 CEP72Q9P209 647 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 PCOLCE2Q9UKZ9 415 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 DOPEY1Q5JWR5 2465 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 MGAQ8IWI9 3026 aa11.49□□□□□ -0.57
TUBE1-201ENST00000368657 GOLGA4Q13439 2230 aaKnown RBP11.48□□□□□ -0.57
TUBE1-201ENST00000368657 IGLV3-22A0A075B6J6 115 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 CASTOR2A6NHX0 329 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 ASAP2O43150 1006 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 ALDH1A2O94788 518 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 SEC24AO95486 1093 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 CYP3A4P08684 503 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 SRGAP2CP0DJJ0 459 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 AKAP5P24588 427 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 ADSSP30520 456 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 SFNP31947 248 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 SETQ01105 290 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-201ENST00000368657 TRDNQ13061 729 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 SART3Q15020 963 aaKnown RBP11.48□□□□□ -0.57
TUBE1-201ENST00000368657 PREPLQ4J6C6 727 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-201ENST00000368657 PKDCCQ504Y2 493 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 ANO7Q6IWH7 933 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 ZNF574Q6ZN55 896 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-201ENST00000368657 GPIHBP1Q8IV16 184 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 ZNF513Q8N8E2 541 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-201ENST00000368657 SPRYD3Q8NCJ5 442 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 CDC6Q99741 560 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 P2RY13Q9BPV8 354 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 FAM83CQ9BQN1 747 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 FBRSL1Q9HCM7 1045 aaKnown RBP11.48□□□□□ -0.57
TUBE1-201ENST00000368657 RIC8AQ9NPQ8 531 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 GKN1Q9NS71 199 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 CACNG4Q9UBN1 327 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 PARP2Q9UGN5 583 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 GON4LQ3T8J9 2241 aa11.48□□□□□ -0.57
TUBE1-201ENST00000368657 KIF26AQ9ULI4 1882 aaPredicted RBP11.47□□□□□ -0.57
TUBE1-201ENST00000368657 TNRC6BQ9UPQ9 1833 aaKnown RBP11.47□□□□□ -0.57
TUBE1-201ENST00000368657 A0A1W2PRU2 124 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 AP5Z1O43299 807 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 THP07101 528 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 MCM2P49736 904 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 CXADRP78310 365 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 TWF1Q12792 350 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 PSMD2Q13200 908 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 AP3B2Q13367 1082 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 SMAD1Q15797 465 aaKnown RBP11.47□□□□□ -0.57
TUBE1-201ENST00000368657 MARCH9Q86YJ5 346 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 MDGA1Q8NFP4 955 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 OR2I1PQ8NGU4 316 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 PRPF31Q8WWY3 499 aaKnown RBP11.47□□□□□ -0.57
TUBE1-201ENST00000368657 NXPE2Q96DL1 559 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 MED8Q96G25 268 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 TBC1D32Q96NH3 1257 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 SEMA4CQ9C0C4 833 aa11.47□□□□□ -0.57
TUBE1-201ENST00000368657 KLK14Q9P0G3 267 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms