RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 MARCH8Q5T0T0 291 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 SPRED2Q7Z698 418 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 USP38Q8NB14 1042 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 PLEKHO2Q8TD55 490 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 UBXN4Q92575 508 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 WDR24Q96S15 920 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 POP1Q99575 1024 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 FAM49AQ9H0Q0 323 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 CDT1Q9H211 546 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 NKX2-4Q9H2Z4 354 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 C2CD2Q9Y426 696 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 PITPNM1O00562 1244 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 CTIFO43310 598 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 TSPAN1O60635 241 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 STAG3L1P0CL83 205 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 MYBL1P10243 752 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 CKBP12277 381 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 DARSP14868 501 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 ATF7P17544 494 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 MCM3P25205 808 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 HOXC8P31273 242 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 GRM5P41594 1212 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 PAFAH1B1P43034 410 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 NOP2P46087 812 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 NOP14P78316 857 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 TFAMQ00059 246 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 CDR2Q01850 454 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 MYO1EQ12965 1108 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZNF618Q5T7W0 954 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 TDRD10Q5VZ19 366 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 GJB7Q6PEY0 223 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 TRAPPC11Q7Z392 1133 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 ARHGEF19Q8IW93 802 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 RPUSD2Q8IZ73 545 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 HELQQ8TDG4 1101 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 PRDM12Q9H4Q4 367 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 PDZD7Q9H5P4 517 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 ARGLU1Q9NWB6 273 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 ITGA11Q9UKX5 1188 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 HYOU1Q9Y4L1 999 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 CEP83Q9Y592 693 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
TRAPPC4-201ENST00000359005 MYO9BQ13459 2157 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 CTAGE15A4D2H0 777 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZBBXA8MT70 800 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZNF263O14978 683 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 TREHO43280 583 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 MED7O43513 233 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 FAM189A1O60320 539 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 ASS1P00966 412 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 CTAGE8P0CG41 777 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 ARF4P18085 180 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 GPC5P78333 572 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 APBA1Q02410 837 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 BFSP2Q13515 415 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 TMEM132DQ14C87 1099 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 KIZQ2M2Z5 673 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZNF699Q32M78 642 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZNF667Q5HYK9 610 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 CCDC181Q5TID7 509 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 PAPD7Q5XG87 772 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 CTAGE6Q86UF2 777 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 GLYCTKQ8IVS8 523 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 CTAGE4Q8IX94 777 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 MSANTD4Q8NCY6 345 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZSWIM2Q8NEG5 633 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 SLC30A5Q8TAD4 765 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 CAGE1Q8TC20 777 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 RFFLQ8WZ73 363 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 GOLGA1Q92805 767 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZBTB10Q96DT7 871 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 SELENOOQ9BVL4 669 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 NIF3L1Q9GZT8 377 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 LACRTQ9GZZ8 138 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 PRDM6Q9NQX0 595 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 NOD1Q9Y239 953 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 PCDHB4Q9Y5E5 795 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 SLC4A7Q9Y6M7 1214 aa11.5□□□□□ -0.57
TRAPPC4-201ENST00000359005 EPOPA6NHQ4 379 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 RFXAPO00287 272 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 CES2O00748 559 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 ABLIM1O14639 778 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 CAND2O75155 1236 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 GPR32O75388 356 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 STAU1O95793 577 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 CXCL10P02778 98 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 CYP11B1P15538 503 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 SELPP16109 830 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 ATP2A2P16615 1042 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 ADAM17P78536 824 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 DEFB103AP81534 67 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 RBP5P82980 135 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 PTK7Q13308 1070 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 TCEAL1Q15170 157 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 AMHR2Q16671 573 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 LIN9Q5TKA1 542 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 LRRC8DQ7L1W4 858 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 RPAINQ86UA6 219 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 SERINC5Q86VE9 423 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 BEST2Q8NFU1 509 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms