RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 C1orf112Q9NSG2 853 aa14.39□□□□□ -0.11
TRIM4-203ENST00000355947 PRR12Q9ULL5 1215 aa14.39□□□□□ -0.11
TRIM4-203ENST00000355947 PCDHB4Q9Y5E5 795 aa14.39□□□□□ -0.11
TRIM4-203ENST00000355947 MAP3K7O43318 606 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 RPS6KA4O75676 772 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 FOSP01100 380 aaPredicted RBP14.38□□□□□ -0.11
TRIM4-203ENST00000355947 EIF2AK2P19525 551 aaKnown RBP14.38□□□□□ -0.11
TRIM4-203ENST00000355947 ATP6V1C1P21283 382 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 SP100P23497 879 aaPredicted RBP14.38□□□□□ -0.11
TRIM4-203ENST00000355947 PGM1P36871 562 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 MRPS35P82673 323 aaKnown RBP14.38□□□□□ -0.11
TRIM4-203ENST00000355947 MKRN3Q13064 507 aaKnown RBP14.38□□□□□ -0.11
TRIM4-203ENST00000355947 PPP2R5CQ13362 524 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 RNF43Q68DV7 783 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 PRR5LQ6MZQ0 368 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 THTPAQ9BU02 230 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 CCDC134Q9H6E4 229 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 RAB20Q9NX57 234 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 CHMP2BQ9UQN3 213 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.38□□□□□ -0.11
TRIM4-203ENST00000355947 STK10O94804 968 aaKnown RBP14.38□□□□□ -0.11
TRIM4-203ENST00000355947 SREBF1P36956 1147 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 GCLCP48506 637 aaPredicted RBP14.38□□□□□ -0.11
TRIM4-203ENST00000355947 PPP1R14CQ8TAE6 165 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 ACER1Q8TDN7 264 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 WDR60Q8WVS4 1066 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 TRIM55Q9BYV6 548 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 LRRC19Q9H756 370 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 CYP4F11Q9HBI6 524 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 ROBO1Q9Y6N7 1651 aa14.38□□□□□ -0.11
TRIM4-203ENST00000355947 XIRP1Q702N8 1843 aaKnown RBP14.38□□□□□ -0.11
TRIM4-203ENST00000355947 E2F8A0AVK6 867 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 TESPA1A2RU30 521 aaPredicted RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 MEI4A8MW99 385 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 B2RBV5 119 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 EIF3DO15371 548 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 BGNP21810 368 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 ACOT2P49753 483 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 TRABD2AQ86V40 505 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 HSD17B14Q9BPX1 270 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 ANKFY1Q9P2R3 1169 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 DENND3A2RUS2 1198 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 BHMG1C9JSJ3 638 aaPredicted RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 ALADP13716 330 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 ALDH18A1P54886 795 aaKnown RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 CEP55Q53EZ4 464 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 SPDYCQ5MJ68 293 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 C3orf62Q6ZUJ4 267 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 ZC3H3Q8IXZ2 948 aaKnown RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 SLC7A6OSQ96CW6 309 aaPredicted RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 NGLY1Q96IV0 654 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 LRMDAQ9H2I8 198 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 PCSK1NQ9UHG2 260 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 MT-ND3P03897 115 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 SERPINB2P05120 415 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 T-ENOLP0DO92 83 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 FGFR1P11362 822 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 VHLP40337 213 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 GABPAQ06546 454 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 ACSBG2Q5FVE4 666 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 TMEM63BQ5T3F8 832 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 KRT39Q6A163 491 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 ACAD10Q6JQN1 1059 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 SCARA5Q6ZMJ2 495 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 EGFL6Q8IUX8 553 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 CCDC33Q8N5R6 958 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 PHC3Q8NDX5 983 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 GRAMD1AQ96CP6 724 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 CFAP36Q96G28 342 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 POLR3CQ9BUI4 534 aaPredicted RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 CADM1Q9BY67 442 aaKnown RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 WDR11Q9BZH6 1224 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 ZNF395Q9H8N7 513 aaPredicted RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 ETAA1Q9NY74 926 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 PRKAG3Q9UGI9 489 aa14.37□□□□□ -0.11
TRIM4-203ENST00000355947 NOCTQ9UK39 431 aaKnown RBP14.37□□□□□ -0.11
TRIM4-203ENST00000355947 EDF1O60869 148 aaKnown RBP14.36□□□□□ -0.11
TRIM4-203ENST00000355947 NEK3P51956 506 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 ATXN3P54252 364 aaPredicted RBP14.36□□□□□ -0.11
TRIM4-203ENST00000355947 NR1H3Q13133 447 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 ALCAMQ13740 583 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 BMT2Q1RMZ1 405 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 WDR44Q5JSH3 913 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 LIN9Q5TKA1 542 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 FBXL13Q8NEE6 735 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 TSSK1BQ9BXA7 367 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 PACSIN3Q9UKS6 424 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 SMCHD1A6NHR9 2005 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 FAM237BA0A1B0GVD1 139 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 PIK3R2O00459 728 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 KIF3CO14782 793 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 FSCN2O14926 492 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 POTEJP0CG39 1038 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 MYL2P10916 166 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 ALAS1P13196 640 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 PTPN4P29074 926 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 RPL7AP62424 266 aaKnown RBP14.36□□□□□ -0.11
TRIM4-203ENST00000355947 PLEKHG4Q58EX7 1191 aa14.36□□□□□ -0.11
TRIM4-203ENST00000355947 FAXCQ5TGI0 409 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms