RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 ZNF544Q6NX49 715 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 SPATA5Q8NB90 893 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 XPO6Q96QU8 1125 aaKnown RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 S100A13Q99584 98 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TMEM206Q9H813 350 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 PHF11Q9UIL8 331 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 RAPGEF6Q8TEU7 1601 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 PNMA8CA0A1B0GUJ8 204 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 H0YIN7 160 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 AP3D1O14617 1153 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 GJA1P17302 382 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 CCT8P50990 548 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 PSMD4P55036 377 aaKnown RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 ZCCHC7Q8N3Z6 543 aaKnown RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 CITED4Q96RK1 184 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 ZSCAN10Q96SZ4 725 aaPredicted RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 RANBP17Q9H2T7 1088 aaKnown RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 ELOVL6Q9H5J4 265 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 PSMB9P28065 219 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 S100A2P29034 98 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 ANKS6Q68DC2 871 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 SLC13A5Q86YT5 568 aaPredicted RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 HS6ST3Q8IZP7 471 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 LPIN2Q92539 896 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 CATSPER2Q96P56 530 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 PRAG1Q86YV5 1406 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TRAPPC8Q9Y2L5 1435 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 IKBKBO14920 756 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 CYP27A1Q02318 531 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 GPR162Q16538 588 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 SLC7A3Q8WY07 619 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 MAN1B1Q9UKM7 699 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 ASAP1Q9ULH1 1129 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 PPIEQ9UNP9 301 aaKnown RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 UHRF1BP1Q6BDS2 1440 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 K7ERI5 159 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 HIST1H2AGP0C0S8 130 aaPredicted RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 FAM200BP0CF97 657 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 HIST1H2ADP20671 130 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 OASLQ15646 514 aaKnown RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 HIST1H2AHQ96KK5 128 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 HIST1H2AJQ99878 128 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 H2AFJQ9BTM1 129 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 ADAM33Q9BZ11 813 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 BHLHE41Q9C0J9 482 aaPredicted RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TMCC3Q9ULS5 477 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 LBPP18428 481 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TRAF3Q13114 568 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TAF2Q6P1X5 1199 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 GATAD2AQ86YP4 633 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TNNQ9UQP3 1299 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 ADGRA3Q8IWK6 1321 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 NOS3P29474 1203 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 ADRM1Q16186 407 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 PYHIN1Q6K0P9 492 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 FAM9CQ8IZT9 166 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 SCFD2Q8WU76 684 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 UBA2Q9UBT2 640 aaPredicted RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 KIF1BO60333 1816 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 CD109Q6YHK3 1445 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 A0A0X1KG70 313 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 B2RBV5 119 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 PSMD12O00232 456 aaPredicted RBP8.38□□□□□ -1.07
SCN8A-201ENST00000354534 NUDT2P50583 147 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 SCNN1DP51172 638 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 FKBP3Q00688 224 aaKnown RBP8.38□□□□□ -1.07
SCN8A-201ENST00000354534 RNF19BQ6ZMZ0 732 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 TASP1Q9H6P5 420 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 SMARCAL1Q9NZC9 954 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 ADCY9O60503 1353 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 CCDC182A6NF36 153 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 ZNF806P0C7X5 589 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 RASGRF1Q13972 1273 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 ERAP2Q6P179 960 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 AK8Q96MA6 479 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 METTL22Q9BUU2 404 aaPredicted RBP8.38□□□□□ -1.07
SCN8A-201ENST00000354534 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
SCN8A-201ENST00000354534 DBR1Q9UK59 544 aaKnown RBP8.38□□□□□ -1.07
SCN8A-201ENST00000354534 BTBD3Q9Y2F9 522 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 DMRT2Q9Y5R5 561 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 ATP10DQ9P241 1426 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 PHF20L1A8MW92 1017 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 TSPAN4O14817 238 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 OR7A10O76100 309 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 ATP6V1B2P21281 511 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.38□□□□□ -1.07
SCN8A-201ENST00000354534 EEPD1Q7L9B9 569 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 DDX53Q86TM3 631 aaKnown RBP8.38□□□□□ -1.07
SCN8A-201ENST00000354534 NACC2Q96BF6 587 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 SLITRK2Q9H156 845 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 RPS6KB2Q9UBS0 482 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 ZNF879B4DU55 563 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 PRLP01236 227 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 MSH3P20585 1137 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 ARSEP51690 589 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 CCDC137Q6PK04 289 aaKnown RBP8.38□□□□□ -1.07
SCN8A-201ENST00000354534 TXNDC11Q6PKC3 985 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 XXYLT1Q8NBI6 393 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 PLBD2Q8NHP8 589 aa8.38□□□□□ -1.07
SCN8A-201ENST00000354534 RUBCNQ92622 972 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms