RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 A0A1B0GUA9 196 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 RAD17O75943 681 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 SIP14410 1827 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 CD58P19256 250 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 SKIV2L2P42285 1042 aaKnown RBP26.01■■□□□ 1.75
CPNE1-202ENST00000352393 WNT7BP56706 349 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 TMED2Q15363 201 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 P3H1Q32P28 736 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 PRUNE1Q86TP1 453 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 PHF13Q86YI8 300 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-202ENST00000352393 ANKRD35Q8N283 1001 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 BICD1Q96G01 975 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 VCPIP1Q96JH7 1222 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 ADAM22Q9P0K1 906 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 KLHL14Q9P2G3 628 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 GABBR1Q9UBS5 961 aa26.01■■□□□ 1.75
CPNE1-202ENST00000352393 FAM47DPA6NHR8 397 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 RASA4BC9J798 803 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 RASA4O43374 803 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 C4BPAP04003 597 aaKnown RBP26■■□□□ 1.75
CPNE1-202ENST00000352393 GCAP28676 217 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 PIK3CAP42336 1068 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 WDR4P57081 412 aaKnown RBP26■■□□□ 1.75
CPNE1-202ENST00000352393 SPOPLQ6IQ16 392 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 MIS18BP1Q6P0N0 1132 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 ECHDC2Q86YB7 292 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 ABRAQ8N0Z2 381 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 KIF2BQ8N4N8 673 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 MCPH1Q8NEM0 835 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 SCINQ9Y6U3 715 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 DOCK5Q9H7D0 1870 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 PARP14Q460N5 1801 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 COL4A5P29400 1685 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 APBA3O96018 575 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 IL9RQ01113 521 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 TRABD2AQ86V40 505 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 PASD1Q8IV76 773 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 KIAA1586Q9HCI6 787 aa26■■□□□ 1.75
CPNE1-202ENST00000352393 PTPRJQ12913 1337 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 VNN1O95497 513 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 PDE4CQ08493 712 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 ADCY1Q08828 1119 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 NR1H3Q13133 447 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 CYP4F22Q6NT55 531 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 ATP6V0A1Q93050 837 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 CFAP57Q96MR6 1250 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 C15orf41Q9Y2V0 281 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 L3MBTL1Q9Y468 752 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 GSTTP1A0A1W2PQM5 241 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 LIASO43766 372 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 DGAT1O75907 488 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 GJC1P36383 396 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 LMNB2Q03252 620 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 DGKZQ13574 1117 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 CUL2Q13617 745 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 ARHGEF16Q5VV41 709 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 NLRX1Q86UT6 975 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 TDRPQ86YL5 185 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 APOBEC3GQ9HC16 384 aaKnown RBP25.99■■□□□ 1.75
CPNE1-202ENST00000352393 UBN1Q9NPG3 1134 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 USTQ9Y2C2 406 aa25.99■■□□□ 1.75
CPNE1-202ENST00000352393 ZBTB12Q9Y330 459 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-202ENST00000352393 DNALI1O14645 258 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-202ENST00000352393 MAGEB2O15479 319 aa25.98■■□□□ 1.75
CPNE1-202ENST00000352393 ASMTLO95671 621 aa25.98■■□□□ 1.75
CPNE1-202ENST00000352393 C1QBPQ07021 282 aaKnown RBP25.98■■□□□ 1.75
CPNE1-202ENST00000352393 MYO1EQ12965 1108 aa25.98■■□□□ 1.75
CPNE1-202ENST00000352393 GSTA5Q7RTV2 222 aa25.98■■□□□ 1.75
CPNE1-202ENST00000352393 GPRASP2Q96D09 838 aa25.98■■□□□ 1.75
CPNE1-202ENST00000352393 KIAA1683Q9H0B3 1180 aa25.98■■□□□ 1.75
CPNE1-202ENST00000352393 EXOC1LA0A1B0GW35 172 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 TLR3O15455 904 aaKnown RBP25.97■■□□□ 1.75
CPNE1-202ENST00000352393 GNA15P30679 374 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 MSH2P43246 934 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 NFX1Q12986 1120 aaKnown RBP25.97■■□□□ 1.75
CPNE1-202ENST00000352393 CCDC142Q17RM4 750 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 XRRA1Q6P2D8 792 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 DRICH1Q6PGQ1 229 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-202ENST00000352393 GLIS1Q8NBF1 620 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 PRCCQ92733 491 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-202ENST00000352393 FNBP1Q96RU3 617 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 PITPNM3Q9BZ71 974 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 SAYSD1Q9NPB0 183 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 TRIM33Q9UPN9 1127 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 A8MUI8 341 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 TNNI1P19237 187 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 LIG4P49917 911 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 NLRP11P59045 1033 aaKnown RBP25.97■■□□□ 1.75
CPNE1-202ENST00000352393 MTMR14Q8NCE2 650 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 DENND1AQ8TEH3 1009 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 TTC25Q96NG3 672 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 FHDC1Q9C0D6 1143 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-202ENST00000352393 POLR3FQ9H1D9 316 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-202ENST00000352393 CNTN6Q9UQ52 1028 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 STYXL1Q9Y6J8 313 aa25.97■■□□□ 1.75
CPNE1-202ENST00000352393 H0YCG3 227 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 PRPF4O43172 522 aaKnown RBP eCLIP25.96■■□□□ 1.752e-8■□□□□ 11.3
CPNE1-202ENST00000352393 UNC5CO95185 931 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 ANP32DO95626 131 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 CCND1P24385 295 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms