RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CD302Q8IX05 232 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 C1orf127Q8N9H9 656 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 ZNF564Q8TBZ8 553 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-203ENST00000350034 ZNF606Q8WXB4 792 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CCDC102AQ96A19 550 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CYFIP2Q96F07 1278 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 ANKRD36BP1Q96IX9 119 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 ZSWIM1Q9BR11 485 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 IMPG2Q9BZV3 1241 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 FAM124BQ9H5Z6 455 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-203ENST00000350034 VIPAS39Q9H9C1 493 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 ZFYVE28Q9HCC9 887 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 STIM2Q9P246 746 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CNOT8Q9UFF9 292 aaKnown RBP7.39□□□□□ -1.23
TRIM55-203ENST00000350034 PCDHGC3Q9UN70 934 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 C2CD2Q9Y426 696 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 PCDHA3Q9Y5H8 950 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 MYH10P35580 1976 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 ZSWIM8A7E2V4 1837 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 MROH7Q68CQ1 1323 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CCDC66A2RUB6 948 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 TULP1O00294 542 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 ATMINO43313 823 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 RAD51CO43502 376 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CA12O43570 354 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CSDE1O75534 798 aaKnown RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 ZMYND10O75800 440 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 LSM8O95777 96 aaKnown RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 GLI1P08151 1106 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 PAEPP09466 180 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 ITGA4P13612 1032 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 DARSP14868 501 aaKnown RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CYP2B6P20813 491 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 COL9A1P20849 921 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 MMP8P22894 467 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 RRM1P23921 792 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CYP2C19P33261 490 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CTNNA1P35221 906 aaKnown RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 SLC1A1P43005 524 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 NSFP46459 744 aaKnown RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 PSEN2P49810 448 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 OSTNP61366 133 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 YWHAEP62258 255 aaKnown RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 IRX5P78411 483 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 SLC7A5Q01650 507 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 SREBF2Q12772 1141 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CRHR2Q13324 411 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 MESDQ14696 234 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 MFSD10Q14728 455 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 PPP2R5EQ16537 467 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 PTPROQ16827 1216 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 ZNF699Q32M78 642 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 DCAF4L1Q3SXM0 396 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 JADE1Q6IE81 842 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 C8orf74Q6P047 294 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 WHAMMQ8TF30 809 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 NLRP7Q8WX94 980 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CPA5Q8WXQ8 436 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 TFAP2BQ92481 460 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 SEC14L1Q92503 715 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 KRT35Q92764 455 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 FAM212AQ96EL1 285 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CPB2Q96IY4 423 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 HHIPL1Q96JK4 782 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 RNPC3Q96LT9 517 aaKnown RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 KRT12Q99456 494 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 GCOM2Q9BZD3 368 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 ZNF518BQ9C0D4 1074 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 SDCBP2Q9H190 292 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 SLITRK6Q9H5Y7 841 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 PLEKHA5Q9HAU0 1116 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CYP3A43Q9HB55 503 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CISHQ9NSE2 258 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 CHORDC1Q9UHD1 332 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-203ENST00000350034 DERAQ9Y315 318 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 TRPM7Q96QT4 1865 aa7.38□□□□□ -1.23
TRIM55-203ENST00000350034 KRIT1O00522 736 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 SART1O43290 800 aaKnown RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 THAP12O43422 761 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 KPNA6O60684 536 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 DUSP11O75319 330 aaKnown RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 PROSCO94903 275 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 ERLIN2O94905 339 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 HEXIM1O94992 359 aaKnown RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 FGGP02679 453 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 WEE2P0C1S8 567 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 CYP2C9P11712 490 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 EIF4BP23588 611 aaKnown RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 AXLP30530 894 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 MAN1A1P33908 653 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 MARCKSL1P49006 195 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 VEGFBP49765 207 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 CPT1AP50416 773 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 RNASE9P60153 205 aaKnown RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 MRPS25P82663 173 aaKnown RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 RBP5P82980 135 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 CBX1P83916 185 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 NNTQ13423 1086 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 MAMLD1Q13495 774 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 ZBTB6Q15916 424 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms