RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SCTRP47872 440 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 JAK3P52333 1124 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 CDH8P55286 799 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 OSTNP61366 133 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 IRF5Q13568 498 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 MSS51Q4VC12 460 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 KCNT1Q5JUK3 1230 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 DENND2CQ68D51 928 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 MIS18BP1Q6P0N0 1132 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 MFSD7Q6UXD7 560 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 CATSPERGQ6ZRH7 1159 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 CAPN12Q6ZSI9 719 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 ZNF280CQ8ND82 737 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 DHX33Q9H6R0 707 aaKnown RBP6.43□□□□□ -1.38
CLCN3-201ENST00000347613 AGO2Q9UKV8 859 aaKnown RBP6.43□□□□□ -1.38
CLCN3-201ENST00000347613 DIS3Q9Y2L1 958 aaKnown RBP6.43□□□□□ -1.38
CLCN3-201ENST00000347613 STYXL1Q9Y6J8 313 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 LRRIQ4A6NIV6 560 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 EXTL3O43909 919 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 ATG7O95352 703 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 PGK2P07205 417 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 CCND2P30279 289 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 MYL6P60660 151 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 GCNT1Q02742 428 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 CUL2Q13617 745 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 PSMD6Q15008 389 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 EFTUD2Q15029 972 aaKnown RBP eCLIP6.43□□□□□ -1.382e-6■■■■■ 33.5
CLCN3-201ENST00000347613 HSDL1Q3SXM5 330 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 BRDTQ58F21 947 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-201ENST00000347613 GJC2Q5T442 439 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-201ENST00000347613 SEL1L2Q5TEA6 688 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 IFNLR1Q8IU57 520 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-201ENST00000347613 ZNF606Q8WXB4 792 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 KLRG1Q96E93 195 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 FAM212AQ96EL1 285 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 RMDN2Q96LZ7 410 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 TWNKQ96RR1 684 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 PPP1R16BQ96T49 567 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 MTMR12Q9C0I1 747 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 CCDC113Q9H0I3 377 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 POLIQ9UNA4 740 aa6.43□□□□□ -1.38
CLCN3-201ENST00000347613 KAT6AQ92794 2004 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 OTOFQ9HC10 1997 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 A0A0B4J269 797 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 GOLGA6L10A6NI86 522 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 C3orf70A6NLC5 250 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PIK3R2O00459 728 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 ZBED4O75132 1171 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 SUPT20HL2P0C7V6 817 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 UBA1P22314 1058 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 SFNP31947 248 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 GTF2H1P32780 548 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 CCDC142Q17RM4 750 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 SMTNL2Q2TAL5 461 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 Q3C1V9 767 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 SUPT20HL1Q3ZLR7 823 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 SCARA5Q6ZMJ2 495 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 RUFY4Q6ZNE9 571 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 SCYL3Q8IZE3 742 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 ABRAQ8N0Z2 381 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 JOSD2Q8TAC2 188 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 GPRASP2Q96D09 838 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 CHMP6Q96FZ7 201 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PIWIL1Q96J94 861 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 SDCBP2Q9H190 292 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PORCNQ9H237 461 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 FGFR1OP2Q9NVK5 253 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 RBAKQ9NYW8 714 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 TMEM120BA0PK00 339 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 GOLGA8SH3BPF8 625 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 GOLGA8MH3BSY2 632 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 RASGRF2O14827 1237 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 RGS16O15492 202 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 MSCO60682 206 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 DGAT1O75907 488 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PROSCO94903 275 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 ECEL1O95672 775 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 OAS1P00973 400 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 MYCNP04198 464 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 GNA15P30679 374 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PIK3CAP42336 1068 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 LIG4P49917 911 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 SMTNP53814 917 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 WDR4P57081 412 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 TGFB2P61812 414 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 MTMR3Q13615 1198 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PPP1R7Q15435 360 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 TARBP2Q15633 366 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 FAM133BQ5BKY9 247 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 ANKRD22Q5VYY1 191 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 TRNP1Q6NT89 227 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 YTHDF3Q7Z739 585 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 AGGF1Q8N302 714 aaeCLIP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 ANKRD42Q8N9B4 389 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 RBBP8NLQ8NC74 664 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 NLGN2Q8NFZ4 835 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PRPF31Q8WWY3 499 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 KIFAP3Q92845 792 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 MRRFQ96E11 262 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms