RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SLC35F6Q8N357 371 aa20.15■□□□□ 0.82
EXOSC3-201ENST00000327304 C1orf127Q8N9H9 656 aa20.15■□□□□ 0.82
EXOSC3-201ENST00000327304 BADQ92934 168 aa20.15■□□□□ 0.82
EXOSC3-201ENST00000327304 TUBB2BQ9BVA1 445 aa20.15■□□□□ 0.82
EXOSC3-201ENST00000327304 RAB20Q9NX57 234 aa20.15■□□□□ 0.82
EXOSC3-201ENST00000327304 MIOSQ9NXC5 875 aa20.15■□□□□ 0.82
EXOSC3-201ENST00000327304 DNAJC12Q9UKB3 198 aa20.15■□□□□ 0.82
EXOSC3-201ENST00000327304 LTBP2Q14767 1821 aa20.14■□□□□ 0.82
EXOSC3-201ENST00000327304 PJA2O43164 708 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 EVI5O60447 810 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 PHACTR2O75167 634 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 SYN1P17600 705 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 PIK3CAP42336 1068 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 MAGEA1P43355 309 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 IKBKEQ14164 716 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 PI4K2AQ9BTU6 479 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 LACRTQ9GZZ8 138 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 TMEM161AQ9NX61 479 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 SIX4Q9UIU6 781 aa20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 AJAP1Q9UKB5 411 aaPredicted RBP20.14■□□□□ 0.81
EXOSC3-201ENST00000327304 CTAGE9A4FU28 777 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 RCCD1A6NED2 376 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 CST3P01034 146 aaPredicted RBP20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 FGFR1P11362 822 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 SCNN1GP51170 649 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 GFPT1Q06210 699 aaPredicted RBP20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 NCOA4Q13772 614 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 CLLU1OSQ5K130 101 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 GJB7Q6PEY0 223 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.13■□□□□ 0.817e-8■■□□□ 12.7
EXOSC3-201ENST00000327304 CXorf38Q8TB03 319 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 PPP1R10Q96QC0 940 aaKnown RBP20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 RPS6KC1Q96S38 1066 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 IL23AQ9NPF7 189 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 UBN1Q9NPG3 1134 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 DPP3Q9NY33 737 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 TRIM10Q9UDY6 481 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 ZMYND8Q9ULU4 1186 aaPredicted RBP20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 INPP5FQ9Y2H2 1132 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 TTC3P53804 2025 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 F8VZ95 297 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 ITGB3P05106 788 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 CCDC172P0C7W6 258 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 SOX5P35711 763 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 ARID5AQ03989 594 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 SOX4Q06945 474 aaPredicted RBP20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 C10orf76Q5T2E6 689 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 RPUSD2Q8IZ73 545 aaKnown RBP20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 HELQQ8TDG4 1101 aa20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 ELAC1Q9H777 363 aaKnown RBP20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 UBQLN1Q9UMX0 589 aaKnown RBP20.13■□□□□ 0.81
EXOSC3-201ENST00000327304 ATP8B3O60423 1300 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 GFPT2O94808 682 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 PFKMP08237 780 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 PTK2Q05397 1052 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 DRAP1Q14919 205 aaPredicted RBP20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 PHLDB3Q6NSJ2 640 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 C16orf59Q7L2K0 433 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 CRIPAKQ8N1N5 446 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 BEST2Q8NFU1 509 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 TSPAN18Q96SJ8 248 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 NAPGQ99747 312 aaPredicted RBP20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 GOLGA2P5Q9HBQ8 144 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 PCDHB7Q9Y5E2 793 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 MRFAP1Q9Y605 127 aa20.12■□□□□ 0.81
EXOSC3-201ENST00000327304 KRT19P08727 400 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 POLR2BP30876 1174 aaKnown RBP20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 MYL6P60660 151 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 FPGSQ05932 587 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 NAB2Q15742 525 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 GLB1LQ6UWU2 654 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 ARHGEF19Q8IW93 802 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 DPF3Q92784 378 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 ITGA11Q9UKX5 1188 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 ABHD14A-ACY1A0A1B0GW23 586 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 INPPL1O15357 1258 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 POMCP01189 267 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 GATMP50440 423 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 EPHB4P54760 987 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 PPIGQ13427 754 aaKnown RBP eCLIP20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 TRPC3Q13507 836 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 SPOPLQ6IQ16 392 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 ZNF571Q7Z3V5 609 aaPredicted RBP20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 VPS36Q86VN1 386 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 SECISBP2LQ93073 1101 aaKnown RBP20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 GPR88Q9GZN0 384 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 APOBEC3GQ9HC16 384 aaKnown RBP20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 ADAMTS1Q9UHI8 967 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 LRFN2Q9ULH4 789 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 TFR2Q9UP52 801 aa20.11■□□□□ 0.81
EXOSC3-201ENST00000327304 A0A087X0T9 212 aa20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 PPEF2O14830 753 aa20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 THP07101 528 aa20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 FAM228BP0C875 321 aa20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 NPAS4Q8IUM7 802 aa20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 GPIHBP1Q8IV16 184 aa20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 TATDN2Q93075 761 aa20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 XYLT2Q9H1B5 865 aa20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 CACNG4Q9UBN1 327 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms