RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TPM3P06753 285 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 PBX1P40424 430 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 PNPLA4P41247 253 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 DPY19L2P1Q6NXN4 242 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 SPRED2Q7Z698 418 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 ZNF558Q96NG5 402 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 LSM14BQ9BX40 385 aaKnown RBP29.17■■■□□ 2.26
HDAC3-201ENST00000305264 VRTNQ9H8Y1 702 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 SIX2Q9NPC8 291 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 TMEM189-UBE2V1I3L0A0 370 aa29.16■■■□□ 2.26
HDAC3-201ENST00000305264 STAU1O95793 577 aaKnown RBP29.16■■■□□ 2.26
HDAC3-201ENST00000305264 ZNF75DP51815 510 aa29.16■■■□□ 2.26
HDAC3-201ENST00000305264 BRCC3P46736 316 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 WDR72Q3MJ13 1102 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 SV2CQ496J9 727 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 WDR44Q5JSH3 913 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 TAF4BQ92750 862 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 TATDN2Q93075 761 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 NXF1Q9UBU9 619 aaKnown RBP29.15■■■□□ 2.26
HDAC3-201ENST00000305264 POLIQ9UNA4 740 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 A0A1W2PQC6 194 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 I3L4J1 428 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 AARSP49588 968 aaKnown RBP eCLIP29.15■■■□□ 2.26
HDAC3-201ENST00000305264 ARHGEF19Q8IW93 802 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 CCDC150Q8NCX0 1101 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 PCMTD1Q96MG8 357 aaPredicted RBP29.15■■■□□ 2.26
HDAC3-201ENST00000305264 COLEC11Q9BWP8 271 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 FAM207AQ9NSI2 230 aaPredicted RBP29.15■■■□□ 2.26
HDAC3-201ENST00000305264 ADAM28Q9UKQ2 775 aa29.15■■■□□ 2.26
HDAC3-201ENST00000305264 KPNA7A9QM74 516 aa29.14■■■□□ 2.26
HDAC3-201ENST00000305264 TIGD5Q53EQ6 642 aa29.14■■■□□ 2.26
HDAC3-201ENST00000305264 ZNF667Q5HYK9 610 aa29.14■■■□□ 2.26
HDAC3-201ENST00000305264 PHLDB3Q6NSJ2 640 aa29.14■■■□□ 2.26
HDAC3-201ENST00000305264 GJB7Q6PEY0 223 aa29.14■■■□□ 2.26
HDAC3-201ENST00000305264 SLC39A11Q8N1S5 342 aa29.14■■■□□ 2.26
HDAC3-201ENST00000305264 NT5C1BQ96P26 610 aa29.14■■■□□ 2.26
HDAC3-201ENST00000305264 SNX9Q9Y5X1 595 aa29.14■■■□□ 2.26
HDAC3-201ENST00000305264 TSC2P49815 1807 aa29.14■■■□□ 2.25
HDAC3-201ENST00000305264 EPHB6O15197 1021 aa29.13■■■□□ 2.25
HDAC3-201ENST00000305264 SCARA5Q6ZMJ2 495 aa29.13■■■□□ 2.25
HDAC3-201ENST00000305264 IGSF21Q96ID5 467 aa29.13■■■□□ 2.25
HDAC3-201ENST00000305264 ARID3AQ99856 593 aa29.13■■■□□ 2.25
HDAC3-201ENST00000305264 NIF3L1Q9GZT8 377 aa29.13■■■□□ 2.25
HDAC3-201ENST00000305264 AAASQ9NRG9 546 aa29.13■■■□□ 2.25
HDAC3-201ENST00000305264 APEX2Q9UBZ4 518 aa29.13■■■□□ 2.25
HDAC3-201ENST00000305264 TRIOBPQ9H2D6 2365 aa29.13■■■□□ 2.25
HDAC3-201ENST00000305264 TADA2AO75478 443 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 ASPAP45381 313 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 MRE11P49959 708 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 C17orf80Q9BSJ5 609 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 GDAP2Q9NXN4 497 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 AJAP1Q9UKB5 411 aaPredicted RBP29.12■■■□□ 2.25
HDAC3-201ENST00000305264 COLQQ9Y215 455 aaPredicted RBP29.12■■■□□ 2.25
HDAC3-201ENST00000305264 VWA8A3KMH1 1905 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 NOL4O94818 638 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 TNNC1P63316 161 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 KLHDC7AQ5VTJ3 777 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 RRAGAQ7L523 313 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 PPM1KQ8N3J5 372 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 KAT5Q92993 513 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 MRFAP1L1Q96HT8 127 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 SENP8Q96LD8 212 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 GANQ9H2C0 597 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 NKX2-4Q9H2Z4 354 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 PLCB1Q9NQ66 1216 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 PCDHB12Q9Y5F1 795 aa29.12■■■□□ 2.25
HDAC3-201ENST00000305264 CDH23Q9H251 3354 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 PLXNA4Q9HCM2 1894 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 ADCY5O95622 1261 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 CTNNB1P35222 781 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 RAB30Q15771 203 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 GPR62Q9BZJ7 368 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 SMYD3Q9H7B4 428 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 SPG21Q9NZD8 308 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 MSRAQ9UJ68 235 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 MTUS1Q9ULD2 1270 aa29.11■■■□□ 2.25
HDAC3-201ENST00000305264 TAP1Q03518 808 aa29.1■■■□□ 2.25
HDAC3-201ENST00000305264 FUT10Q6P4F1 479 aa29.1■■■□□ 2.25
HDAC3-201ENST00000305264 DSTYKQ6XUX3 929 aa29.1■■■□□ 2.25
HDAC3-201ENST00000305264 VSTM4Q8IW00 320 aa29.1■■■□□ 2.25
HDAC3-201ENST00000305264 SUSD3Q96L08 255 aa29.1■■■□□ 2.25
HDAC3-201ENST00000305264 VN1R3Q9BXE9 311 aa29.1■■■□□ 2.25
HDAC3-201ENST00000305264 FHOD1Q9Y613 1164 aa29.1■■■□□ 2.25
HDAC3-201ENST00000305264 RAP1GAPP47736 663 aa29.1■■■□□ 2.25
HDAC3-201ENST00000305264 MMS19Q96T76 1030 aa29.1■■■□□ 2.25
HDAC3-201ENST00000305264 SF3B1O75533 1304 aaKnown RBP eCLIP29.09■■■□□ 2.254e-6■■■■■ 108.6
HDAC3-201ENST00000305264 CYB561D2O14569 222 aa29.09■■■□□ 2.25
HDAC3-201ENST00000305264 PPM1AP35813 382 aa29.09■■■□□ 2.25
HDAC3-201ENST00000305264 BMPR1AP36894 532 aa29.09■■■□□ 2.25
HDAC3-201ENST00000305264 NEK11Q8NG66 645 aa29.09■■■□□ 2.25
HDAC3-201ENST00000305264 TMEM169Q96HH4 297 aa29.09■■■□□ 2.25
HDAC3-201ENST00000305264 SDCBP2Q9H190 292 aa29.09■■■□□ 2.25
HDAC3-201ENST00000305264 UBE2TQ9NPD8 197 aaPredicted RBP29.09■■■□□ 2.25
HDAC3-201ENST00000305264 L1RE1Q9UN81 338 aa29.09■■■□□ 2.25
HDAC3-201ENST00000305264 M0QZQ0 153 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 EFEMP2O95967 443 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 UCHL3P15374 230 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 CUL2Q13617 745 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 SOWAHAQ2M3V2 549 aa29.08■■■□□ 2.25
HDAC3-201ENST00000305264 IQCEQ6IPM2 695 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms