RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 KIF4AO95239 1232 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 GALTP07902 379 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 RPL9P32969 192 aaKnown RBP16.27■□□□□ 0.2
CCDC140-201ENST00000295226 LILRA4P59901 499 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 NOP14P78316 857 aaKnown RBP16.27■□□□□ 0.2
CCDC140-201ENST00000295226 MLLT1Q03111 559 aaPredicted RBP16.27■□□□□ 0.2
CCDC140-201ENST00000295226 WDR72Q3MJ13 1102 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 WDR44Q5JSH3 913 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 KLHDC7AQ5VTJ3 777 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 SCARA5Q6ZMJ2 495 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 TMEM173Q86WV6 379 aaPredicted RBP16.27■□□□□ 0.2
CCDC140-201ENST00000295226 VSTM4Q8IW00 320 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 CMTR2Q8IYT2 770 aaKnown RBP16.27■□□□□ 0.2
CCDC140-201ENST00000295226 CPLX3Q8WVH0 158 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 ARID3AQ99856 593 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 UBE2TQ9NPD8 197 aaPredicted RBP16.27■□□□□ 0.2
CCDC140-201ENST00000295226 LAMA3Q16787 3333 aa16.27■□□□□ 0.2
CCDC140-201ENST00000295226 A0A1W2PQC6 194 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 RNF225M0QZC1 329 aaPredicted RBP16.27■□□□□ 0.19
CCDC140-201ENST00000295226 ARHGEF15O94989 841 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 ALDH2P05091 517 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 BRCC3P46736 316 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 RAP1GAPP47736 663 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 GOLGA8FQ08AF8 430 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 GOLGA8DPQ0D2H9 430 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 CHRDL2Q6WN34 429 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 SPRED2Q7Z698 418 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 PPM1KQ8N3J5 372 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 BCL7CQ8WUZ0 217 aaPredicted RBP16.27■□□□□ 0.19
CCDC140-201ENST00000295226 DDX27Q96GQ7 796 aaKnown RBP16.27■□□□□ 0.19
CCDC140-201ENST00000295226 NT5C1BQ96P26 610 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 GANQ9H2C0 597 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 NLRC4Q9NPP4 1024 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 IMPACTQ9P2X3 320 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 FAN1Q9Y2M0 1017 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 SNX9Q9Y5X1 595 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 FHOD1Q9Y613 1164 aa16.27■□□□□ 0.19
CCDC140-201ENST00000295226 PBX2P40425 430 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 TAF6P49848 677 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 CDH8P55286 799 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 GSDMDP57764 484 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 POLR2FP61218 127 aaKnown RBP16.26■□□□□ 0.19
CCDC140-201ENST00000295226 MYO1EQ12965 1108 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 TIGD5Q53EQ6 642 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 IQCEQ6IPM2 695 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 DCLRE1AQ6PJP8 1040 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 CCDC186Q7Z3E2 898 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 FIBCD1Q8N539 461 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 LRRC52Q8N7C0 313 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 NEK11Q8NG66 645 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 KIAA1524Q8TCG1 905 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 IMPG2Q9BZV3 1241 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 SMYD3Q9H7B4 428 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 MARCH5Q9NX47 278 aa16.26■□□□□ 0.19
CCDC140-201ENST00000295226 KPNA7A9QM74 516 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 WEE2P0C1S8 567 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 PNMA6AP0CW24 399 aaPredicted RBP16.25■□□□□ 0.19
CCDC140-201ENST00000295226 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
CCDC140-201ENST00000295226 ATICP31939 592 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 ARHGAP44Q17R89 818 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 ZNF667Q5HYK9 610 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 SPECC1LQ69YQ0 1117 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 KCNT2Q6UVM3 1135 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 CCDC150Q8NCX0 1101 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 KREMEN1Q96MU8 473 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 UROC1Q96N76 676 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 SDCBP2Q9H190 292 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 PLCB1Q9NQ66 1216 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 APEX2Q9UBZ4 518 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 DNAJC12Q9UKB3 198 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 TIMM13Q9Y5L4 95 aaPredicted RBP16.25■□□□□ 0.19
CCDC140-201ENST00000295226 GBF1Q92538 1859 aa16.25■□□□□ 0.19
CCDC140-201ENST00000295226 TADA2AO75478 443 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 LINC00271P0C7V0 271 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 UCHL3P15374 230 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 ALDH7A1P49419 539 aaKnown RBP16.24■□□□□ 0.19
CCDC140-201ENST00000295226 RAPGEF1Q13905 1077 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 COLGALT1Q8NBJ5 622 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 SENP8Q96LD8 212 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 ZNF560Q96MR9 790 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 TMEM175Q9BSA9 504 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 YBX2Q9Y2T7 364 aaKnown RBP16.24■□□□□ 0.19
CCDC140-201ENST00000295226 CYB561D2O14569 222 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 GYPCP04921 128 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 BMP8BP34820 402 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 PNPLA4P41247 253 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 ASPAP45381 313 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 TNNC1P63316 161 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 SV2CQ496J9 727 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 DSTYKQ6XUX3 929 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 SP7Q8TDD2 431 aaPredicted RBP16.24■□□□□ 0.19
CCDC140-201ENST00000295226 TAF4BQ92750 862 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 B3GALT6Q96L58 329 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 ZNF830Q96NB3 372 aaPredicted RBP16.24■□□□□ 0.19
CCDC140-201ENST00000295226 COLEC11Q9BWP8 271 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 GPR62Q9BZJ7 368 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 NIF3L1Q9GZT8 377 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 KCNF1Q9H3M0 494 aa16.24■□□□□ 0.19
CCDC140-201ENST00000295226 VRTNQ9H8Y1 702 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms