RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 PDCD11Q14690 1871 aaKnown RBP16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 NSFP46459 744 aaKnown RBP16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 CRYBB1P53674 252 aaPredicted RBP16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 CXCL17Q6UXB2 119 aa16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 ZNF564Q8TBZ8 553 aaPredicted RBP16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 KIF12Q96FN5 646 aa16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 NUP85Q9BW27 656 aa16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 EIF2AQ9BY44 585 aaKnown RBP16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 BCO2Q9BYV7 579 aa16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 PLEKHA5Q9HAU0 1116 aa16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 CNOT8Q9UFF9 292 aaKnown RBP16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 POLIQ9UNA4 740 aa16.76■□□□□ 0.27
FOXRED1-201ENST00000263578 WEE2P0C1S8 567 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 MYBL1P10243 752 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 POLR2BP30876 1174 aaKnown RBP16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 NOMO3P69849 1222 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 PPP1R2P3Q6NXS1 205 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 MCOLN2Q8IZK6 566 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 MMGT1Q8N4V1 131 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 CPA5Q8WXQ8 436 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 CYFIP2Q96F07 1278 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 SNX27Q96L92 541 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 PNKPQ96T60 521 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 TRIM6Q9C030 488 aaPredicted RBP16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 VRTNQ9H8Y1 702 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 XPNPEP3Q9NQH7 507 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 CREBZFQ9NS37 354 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 SNTG2Q9NY99 539 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 GTF2IRD1Q9UHL9 959 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 RAB21Q9UL25 225 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 PIN4Q9Y237 131 aaKnown RBP16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 DERAQ9Y315 318 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 ADAMTS4O75173 837 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 TUBBP07437 444 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 YARSP54577 528 aaKnown RBP16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 NBPF20Q3BBV1 942 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 WDR72Q3MJ13 1102 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 PASD1Q8IV76 773 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 TMEM130Q8N3G9 435 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 ZNF606Q8WXB4 792 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 SELENOOQ9BVL4 669 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 AVENQ9NQS1 362 aaPredicted RBP16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 DPP3Q9NY33 737 aa16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 CHORDC1Q9UHD1 332 aaPredicted RBP16.75■□□□□ 0.27
FOXRED1-201ENST00000263578 THSD7BQ9C0I4 1608 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 CFHP08603 1231 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 P4HA1P13674 534 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 ELNP15502 786 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 GUCY2FP51841 1108 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 BRD3Q15059 726 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 CCDC70Q6NSX1 233 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 MON1BQ7L1V2 547 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 CFHR5Q9BXR6 569 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 RNF186Q9NXI6 227 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 AGAP1Q9UPQ3 857 aa16.74■□□□□ 0.27
FOXRED1-201ENST00000263578 TARSL2A2RTX5 802 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 CCDC151A5D8V7 595 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 CCND3P30281 292 aaPredicted RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 RAP1GAPP47736 663 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 RBP5P82980 135 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 TMCO3Q6UWJ1 677 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 HPDLQ96IR7 371 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 NXF3Q9H4D5 531 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 ALG6Q9Y672 507 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 TMEM110-MUSTN1A8MSY1 372 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 M0QZ92 97 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 DDX3YO15523 660 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 CEP104O60308 925 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 LSM8O95777 96 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 STAU1O95793 577 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 BRD2P25440 801 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 SSTR3P32745 418 aaPredicted RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 MRPS6P82932 125 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 MESDQ14696 234 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 PHF13Q86YI8 300 aaPredicted RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 ACTRT1Q8TDG2 376 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 CELF4Q9BZC1 486 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 SMYD3Q9H7B4 428 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 CYP3A43Q9HB55 503 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 RBM12Q9NTZ6 932 aaKnown RBP16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 HES2Q9Y543 173 aa16.73■□□□□ 0.27
FOXRED1-201ENST00000263578 CENPFP49454 3210 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 MIF4GDA9UHW6 222 aaKnown RBP16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 PGRMC1O00264 195 aaKnown RBP16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 RECQL4O94761 1208 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 RRM1P23921 792 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 FAM47CQ5HY64 1035 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 LIN9Q5TKA1 542 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 GDF6Q6KF10 455 aaPredicted RBP16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 WDR93Q6P2C0 686 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 RSPH3Q86UC2 560 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 USP38Q8NB14 1042 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 VCPIP1Q96JH7 1222 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 RPS6KC1Q96S38 1066 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 C11orf70Q9BRQ4 267 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 SDCBP2Q9H190 292 aa16.72■□□□□ 0.27
FOXRED1-201ENST00000263578 CNTN3Q9P232 1028 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms