RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NXF1Q9UBU9 619 aaKnown RBP29.53■■■□□ 2.32
SMARCD3-201ENST00000262188 APEX2Q9UBZ4 518 aa29.53■■■□□ 2.32
SMARCD3-201ENST00000262188 NR2E3Q9Y5X4 410 aa29.53■■■□□ 2.32
SMARCD3-201ENST00000262188 ANO9A1A5B4 782 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 SPTLC1O15269 473 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 DGKIO75912 1065 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 UCHL3P15374 230 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 RBP5P82980 135 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 SCARA5Q6ZMJ2 495 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 HASPINQ8TF76 798 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 HPDLQ96IR7 371 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 UBE2TQ9NPD8 197 aaPredicted RBP29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 SLC38A7Q9NVC3 462 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 FAM53CQ9NYF3 392 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 CAPN15O75808 1086 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 PBX3P40426 434 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 NT5C1BQ96P26 610 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 PLCB1Q9NQ66 1216 aa29.52■■■□□ 2.32
SMARCD3-201ENST00000262188 PIRO00625 290 aa29.51■■■□□ 2.31
SMARCD3-201ENST00000262188 XPOTO43592 962 aaKnown RBP29.51■■■□□ 2.31
SMARCD3-201ENST00000262188 CYP3A5P20815 502 aa29.51■■■□□ 2.31
SMARCD3-201ENST00000262188 RAPGEF1Q13905 1077 aa29.51■■■□□ 2.31
SMARCD3-201ENST00000262188 ARHGAP44Q17R89 818 aa29.51■■■□□ 2.31
SMARCD3-201ENST00000262188 WDR44Q5JSH3 913 aa29.51■■■□□ 2.31
SMARCD3-201ENST00000262188 KREMEN1Q96MU8 473 aa29.51■■■□□ 2.31
SMARCD3-201ENST00000262188 DNAJC12Q9UKB3 198 aa29.51■■■□□ 2.31
SMARCD3-201ENST00000262188 TUSC3Q13454 348 aa29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 SGSM1Q2NKQ1 1148 aa29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 WDR72Q3MJ13 1102 aa29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 FEZ2Q9UHY8 353 aaPredicted RBP29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 PODXLO00592 558 aa29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 EFCAB14O75071 495 aa29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 ITGB1P05556 798 aa29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 LRPAP1P30533 357 aa29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 NRDE2Q9H7Z3 1164 aa29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.5■■■□□ 2.31
SMARCD3-201ENST00000262188 ZC3H11AO75152 810 aaKnown RBP eCLIP29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 RAP1GAPP47736 663 aa29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 DSC1Q08554 894 aa29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 FAM43BQ6ZT52 329 aaPredicted RBP29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 PPFIBP1Q86W92 1011 aa29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 COLGALT2Q8IYK4 626 aa29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 HERVK_113Q902F9 699 aa29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 TSPAN18Q96SJ8 248 aa29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 NAA15Q9BXJ9 866 aaKnown RBP29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 IMPG2Q9BZV3 1241 aa29.49■■■□□ 2.31
SMARCD3-201ENST00000262188 UPP1Q16831 310 aa29.48■■■□□ 2.31
SMARCD3-201ENST00000262188 CCDC186Q7Z3E2 898 aa29.48■■■□□ 2.31
SMARCD3-201ENST00000262188 BAP1Q92560 729 aa29.48■■■□□ 2.31
SMARCD3-201ENST00000262188 PRG3Q9Y2Y8 225 aaPredicted RBP29.48■■■□□ 2.31
SMARCD3-201ENST00000262188 I3L4J1 428 aa29.48■■■□□ 2.31
SMARCD3-201ENST00000262188 HOXA2O43364 376 aa29.48■■■□□ 2.31
SMARCD3-201ENST00000262188 CACNA2D4Q7Z3S7 1137 aa29.48■■■□□ 2.31
SMARCD3-201ENST00000262188 KIF18AQ8NI77 898 aa29.48■■■□□ 2.31
SMARCD3-201ENST00000262188 KIAA1524Q8TCG1 905 aa29.48■■■□□ 2.31
SMARCD3-201ENST00000262188 NT5C1B-RDH14C9J2C7 533 aa29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 OR1G1P47890 313 aa29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 CDH8P55286 799 aa29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 E4F1Q66K89 784 aaPredicted RBP29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 ZNF689Q96CS4 500 aaPredicted RBP29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 FAM193BQ96PV7 902 aaPredicted RBP29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 SMYD3Q9H7B4 428 aa29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 RC3H2Q9HBD1 1191 aaKnown RBP29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 CEP72Q9P209 647 aa29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 KANSL3Q9P2N6 904 aa29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 CAPN11Q9UMQ6 739 aa29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 SLC4A7Q9Y6M7 1214 aa29.47■■■□□ 2.31
SMARCD3-201ENST00000262188 H0YGN5 161 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 WEE2P0C1S8 567 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 ASPAP45381 313 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 CCDC150Q8NCX0 1101 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 GPR88Q9GZN0 384 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 SDCBP2Q9H190 292 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 SNX9Q9Y5X1 595 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 LAMA3Q16787 3333 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 B3GAT3O94766 335 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 KIF4AO95239 1232 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 LILRA4P59901 499 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 SHHQ15465 462 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 ZNF667Q5HYK9 610 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 CD300LGQ6UXG3 332 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 YME1L1Q96TA2 773 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 NUP58Q9BVL2 599 aa29.46■■■□□ 2.31
SMARCD3-201ENST00000262188 LRRC53A6NM62 1247 aa29.45■■■□□ 2.31
SMARCD3-201ENST00000262188 KRT9P35527 623 aa29.45■■■□□ 2.31
SMARCD3-201ENST00000262188 CUL2Q13617 745 aa29.45■■■□□ 2.31
SMARCD3-201ENST00000262188 DRAP1Q14919 205 aaPredicted RBP29.45■■■□□ 2.31
SMARCD3-201ENST00000262188 FAM109BQ6ICB4 259 aaPredicted RBP29.45■■■□□ 2.31
SMARCD3-201ENST00000262188 LRRC52Q8N7C0 313 aa29.45■■■□□ 2.31
SMARCD3-201ENST00000262188 TC2NQ8N9U0 490 aa29.45■■■□□ 2.31
SMARCD3-201ENST00000262188 NIF3L1Q9GZT8 377 aa29.45■■■□□ 2.31
SMARCD3-201ENST00000262188 MFAP3LO75121 409 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 GJB5O95377 273 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 CALCAP01258 141 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 CD58P19256 250 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 BRCC3P46736 316 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 TAF6P49848 677 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 MYO1EQ12965 1108 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 FIGNQ5HY92 759 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 LRRC43Q8N309 656 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms