RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.51■□□□□ 0.87
SCARB1-201ENST00000261693 MAML1Q92585 1016 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 TRIM11Q96F44 468 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 MYLK2Q9H1R3 596 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 EURLQ9NYK6 297 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 NOP53Q9NZM5 478 aaKnown RBP20.51■□□□□ 0.87
SCARB1-201ENST00000261693 DNPEPQ9ULA0 475 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 TLR3O15455 904 aaKnown RBP20.51■□□□□ 0.87
SCARB1-201ENST00000261693 PSTPIP1O43586 416 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 HLA-DRAP01903 254 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 PIK3CAP42336 1068 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 RNF43Q68DV7 783 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.51■□□□□ 0.871e-7■□□□□ 8.9
SCARB1-201ENST00000261693 BBOF1Q8ND07 529 aa20.51■□□□□ 0.87
SCARB1-201ENST00000261693 PTPRJQ12913 1337 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 A0A1B0GUA9 196 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 ZNF862O60290 1169 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 LIN9Q5TKA1 542 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 TDRD10Q5VZ19 366 aaKnown RBP20.5■□□□□ 0.87
SCARB1-201ENST00000261693 ZCCHC9Q8N567 271 aaKnown RBP20.5■□□□□ 0.87
SCARB1-201ENST00000261693 ACSF2Q96CM8 615 aaPredicted RBP20.5■□□□□ 0.87
SCARB1-201ENST00000261693 HAUS1Q96CS2 278 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 FNBP1Q96RU3 617 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 ZNF148Q9UQR1 794 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 PCDHB4Q9Y5E5 795 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 WDR81Q562E7 1941 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 CCND1P24385 295 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 PKN2Q16513 984 aaKnown RBP20.5■□□□□ 0.87
SCARB1-201ENST00000261693 BRDTQ58F21 947 aaPredicted RBP20.5■□□□□ 0.87
SCARB1-201ENST00000261693 TAS1R3Q7RTX0 852 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 KATNAL2Q8IYT4 538 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 ERP27Q96DN0 273 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 TMEM237Q96Q45 408 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 GRID1Q9ULK0 1009 aa20.5■□□□□ 0.87
SCARB1-201ENST00000261693 UNC5CO95185 931 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 KRT15P19012 456 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 RPL7AP62424 266 aaKnown RBP20.49■□□□□ 0.87
SCARB1-201ENST00000261693 PTP4A2Q12974 167 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 ARHGEF16Q5VV41 709 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 TRABD2AQ86V40 505 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 NTPCRQ9BSD7 190 aaKnown RBP20.49■□□□□ 0.87
SCARB1-201ENST00000261693 KIAA1586Q9HCI6 787 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 PHTF1Q9UMS5 762 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 MYH9P35579 1960 aaKnown RBP20.49■□□□□ 0.87
SCARB1-201ENST00000261693 ASMTLO95671 621 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 CCNB1P14635 433 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 GNA15P30679 374 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 NLRP11P59045 1033 aaKnown RBP20.49■□□□□ 0.87
SCARB1-201ENST00000261693 NOMO3P69849 1222 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 LACTBP83111 547 aaPredicted RBP20.49■□□□□ 0.87
SCARB1-201ENST00000261693 KRT76Q01546 638 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 NFX1Q12986 1120 aaKnown RBP20.49■□□□□ 0.87
SCARB1-201ENST00000261693 C15orf39Q6ZRI6 1047 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 ZNF677Q86XU0 584 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 OGFOD1Q8N543 542 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 ZNF570Q96NI8 536 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 PDCD2LQ9BRP1 358 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 MOV10L1Q9BXT6 1211 aaKnown RBP20.49■□□□□ 0.87
SCARB1-201ENST00000261693 VPS37BQ9H9H4 285 aa20.49■□□□□ 0.87
SCARB1-201ENST00000261693 TRPC5Q9UL62 973 aaPredicted RBP20.49■□□□□ 0.87
SCARB1-201ENST00000261693 ZC3H11AO75152 810 aaKnown RBP eCLIP20.48■□□□□ 0.875e-6■■□□□ 11.9
SCARB1-201ENST00000261693 PECAM1P16284 738 aaPredicted RBP20.48■□□□□ 0.87
SCARB1-201ENST00000261693 TARSP26639 723 aaKnown RBP20.48■□□□□ 0.87
SCARB1-201ENST00000261693 SFNP31947 248 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 RPA3P35244 121 aaPredicted RBP20.48■□□□□ 0.87
SCARB1-201ENST00000261693 ARSEP51690 589 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 ATP11AP98196 1134 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 GPS1Q13098 491 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 STYK1Q6J9G0 422 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 VSIG1Q86XK7 387 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 EXD1Q8NHP7 514 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 FBF1Q8TES7 1133 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 SPIRE2Q8WWL2 714 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 UTP4Q969X6 686 aaKnown RBP20.48■□□□□ 0.87
SCARB1-201ENST00000261693 CFAP57Q96MR6 1250 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 TRABDQ9H4I3 376 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 APOBEC3GQ9HC16 384 aaKnown RBP20.48■□□□□ 0.87
SCARB1-201ENST00000261693 PCDHA10Q9Y5I2 948 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 ACTL7BQ9Y614 415 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 DOCK5Q9H7D0 1870 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 LIASO43766 372 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 BPIFB4P59827 614 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 SPDYE2Q495Y8 402 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 SCARA3Q6AZY7 606 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 SWSAP1Q6NVH7 229 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 RSBN1LQ6PCB5 846 aaPredicted RBP20.48■□□□□ 0.87
SCARB1-201ENST00000261693 RELL1Q8IUW5 271 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 KCNV2Q8TDN2 545 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 MRPL47Q9HD33 250 aaKnown RBP20.48■□□□□ 0.87
SCARB1-201ENST00000261693 PXMP2Q9NR77 195 aa20.48■□□□□ 0.87
SCARB1-201ENST00000261693 BANF1O75531 89 aa20.47■□□□□ 0.87
SCARB1-201ENST00000261693 PIAS1O75925 651 aa20.47■□□□□ 0.87
SCARB1-201ENST00000261693 VNN1O95497 513 aa20.47■□□□□ 0.87
SCARB1-201ENST00000261693 ASNSP08243 561 aa20.47■□□□□ 0.87
SCARB1-201ENST00000261693 ACO1P21399 889 aaKnown RBP20.47■□□□□ 0.87
SCARB1-201ENST00000261693 PAX7P23759 505 aa20.47■□□□□ 0.87
SCARB1-201ENST00000261693 LIG4P49917 911 aa20.47■□□□□ 0.87
SCARB1-201ENST00000261693 CRYMQ14894 314 aa20.47■□□□□ 0.87
SCARB1-201ENST00000261693 KRT27Q7Z3Y8 459 aa20.47■□□□□ 0.87
SCARB1-201ENST00000261693 ABRAQ8N0Z2 381 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms