RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 C11orf84Q9BUA3 381 aaPredicted RBP14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 BRAFP15056 766 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 LEMD2Q8NC56 503 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 ZBTB18Q99592 522 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 BRD8Q9H0E9 1235 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 FBXO2Q9UK22 296 aaPredicted RBP14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 NAGPAQ9UK23 515 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 CICQ96RK0 1608 aaPredicted RBP14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 RTP1P59025 263 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 ANAPC7Q9UJX3 599 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 SMIM10L2AP0DMW4 78 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 SMIM10L2BP0DMW5 78 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 MSH2P43246 934 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 RHBDL3P58872 404 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 BRD3Q15059 726 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 GLE1Q53GS7 698 aaKnown RBP14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 C11orf57Q6ZUT1 292 aaPredicted RBP14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 SLC20A1Q8WUM9 679 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 PPCSQ9HAB8 311 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 SETD4Q9NVD3 440 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 RGS16O15492 202 aaPredicted RBP14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 APOA4P06727 396 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 LCP1P13796 627 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 CENPCQ03188 943 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 SEC23AQ15436 765 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 FBXO47Q5MNV8 452 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 IRAK1BP1Q5VVH5 260 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 OVOS1Q6IE37 1185 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 RBBP8NLQ8NC74 664 aaPredicted RBP14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 SLC13A4Q9UKG4 626 aa14.15□□□□□ -0.14
PRPF38A-201ENST00000257181 POMCP01189 267 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 CKMP06732 381 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 ROR1Q01973 937 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 TSTA3Q13630 321 aaPredicted RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 CCDC6Q16204 474 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 LINC00523Q86TU6 105 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 SH3KBP1Q96B97 665 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 IL17RAQ96F46 866 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 SPG21Q9NZD8 308 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 E5RI56 91 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 H0Y626 953 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 KIF3CO14782 793 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 HLA-DRAP01903 254 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 CSH1P0DML2 217 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 CSH2P0DML3 217 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 ARHGAP25P42331 645 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 NOMO2Q5JPE7 1267 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 DNAJB3Q8WWF6 145 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 NHEJ1Q9H9Q4 299 aaPredicted RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 PCDHA13Q9Y5I0 950 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 TRAV19A0A0A6YYK7 116 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 C3orf70A6NLC5 250 aaPredicted RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 ITGA7Q13683 1181 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 DRAP1Q14919 205 aaPredicted RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 TBCCQ15814 346 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 PAN2Q504Q3 1202 aaKnown RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 PIK3R5Q8WYR1 880 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 SMARCD1Q96GM5 515 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 PPP2R2CQ9Y2T4 447 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 EEF2KO00418 725 aaKnown RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 ZWINTO95229 277 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 FMO5P49326 533 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 NME3Q13232 169 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 BOLA3Q53S33 107 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 PDE12Q6L8Q7 609 aaKnown RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 RETSATQ6NUM9 610 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 PPFIBP2Q8ND30 876 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 ZNF564Q8TBZ8 553 aaPredicted RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 SYN2Q92777 582 aaPredicted RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 AGPAT1Q99943 283 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 ABI2Q9NYB9 513 aaPredicted RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 ROBO3Q96MS0 1386 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 MAPK13O15264 365 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 GADD45BO75293 160 aaPredicted RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 GPC4O75487 556 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 INHAP05111 366 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 MAP4P27816 1152 aaKnown RBP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 CASP14P31944 242 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 PPP3CCP48454 512 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 TMEM62Q0P6H9 643 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 KRT31Q15323 416 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 CDO1Q16878 200 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 KLHL38Q2WGJ6 581 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 UGT3A1Q6NUS8 523 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 VSTM4Q8IW00 320 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 FAF2Q96CS3 445 aa14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.14□□□□□ -0.15
PRPF38A-201ENST00000257181 NFIBO00712 420 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 CREB3O43889 395 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 MOCS2O96007 188 aaPredicted RBP14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 CYP2C18P33260 490 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 ADCYAP1R1P41586 468 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 MAPK8P45983 427 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 LBX2Q6XYB7 198 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 TRMT11Q7Z4G4 463 aaKnown RBP14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 CCDC13Q8IYE1 715 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 FOXP3Q9BZS1 431 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 GPR88Q9GZN0 384 aa14.13□□□□□ -0.15
PRPF38A-201ENST00000257181 ZDHHC4Q9NPG8 344 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms