RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 MYO15AQ9UKN7 3530 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 URB1O60287 2271 aaKnown RBP12.44□□□□□ -0.42
LIN28A-201ENST00000254231 KBTBD13C9JR72 458 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 DYNC1I1O14576 645 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 VNN1O95497 513 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 GNAT1P11488 350 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ATF7P17544 494 aaPredicted RBP12.44□□□□□ -0.42
LIN28A-201ENST00000254231 MUTP22033 750 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 RRM1P23921 792 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ARHGAP25P42331 645 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 OR1G1P47890 313 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 SLC26A2P50443 739 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ACLYP53396 1101 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 GHRHRQ02643 423 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 NOTUMQ6P988 496 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 C1orf127Q8N9H9 656 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ADAM33Q9BZ11 813 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ZWILCHQ9H900 591 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ADAM22Q9P0K1 906 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 M0QYV0 167 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 CLDN5O00501 218 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 LCP1P13796 627 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 GARTP22102 1010 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 TM4SF4P48230 202 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 PAK2Q13177 524 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 CAPN12Q6ZSI9 719 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 NOA1Q8NC60 698 aaKnown RBP12.43□□□□□ -0.42
LIN28A-201ENST00000254231 TTLL3Q9Y4R7 772 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 CTAGE15A4D2H0 777 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 CTAGE8P0CG41 777 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 PAFAH1B1P43034 410 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 CUL2Q13617 745 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 OR6B2Q6IFH4 312 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 NYAP1Q6ZVC0 841 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 CTAGE6Q86UF2 777 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 CTAGE4Q8IX94 777 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 RNF25Q96BH1 459 aaPredicted RBP12.43□□□□□ -0.42
LIN28A-201ENST00000254231 MKNK1Q9BUB5 465 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 PHLPP2Q6ZVD8 1323 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 SMIM23A6NLE4 172 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 LGR5O75473 907 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 F2P00734 622 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 OR4Q2P0C623 313 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 BRCC3P46736 316 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 RPS6KA1Q15418 735 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 SCN4BQ8IWT1 228 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 NUP85Q9BW27 656 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 CELF4Q9BZC1 486 aaKnown RBP12.43□□□□□ -0.42
LIN28A-201ENST00000254231 DNAH14Q0VDD8 3507 aa12.43□□□□□ -0.42
LIN28A-201ENST00000254231 RRN3P2A6NIE6 340 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 EIF3CLB5ME19 914 aaKnown RBP12.42□□□□□ -0.42
LIN28A-201ENST00000254231 HMGCRP04035 888 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 CCDC172P0C7W6 258 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 SPATA31D3P0C874 917 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 ATP13A4Q4VNC1 1196 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 HP1BP3Q5SSJ5 553 aaPredicted RBP12.42□□□□□ -0.42
LIN28A-201ENST00000254231 SPATA31D4Q6ZUB0 917 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 TWNKQ96RR1 684 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 EIF3CQ99613 913 aaKnown RBP12.42□□□□□ -0.42
LIN28A-201ENST00000254231 PCDHB2Q9Y5E7 798 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 GOLGA8CPA6NN73 597 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 BUB1BO60566 1050 aaPredicted RBP12.42□□□□□ -0.42
LIN28A-201ENST00000254231 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
LIN28A-201ENST00000254231 DARSP14868 501 aaKnown RBP12.42□□□□□ -0.42
LIN28A-201ENST00000254231 MARCKSL1P49006 195 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 ARRDC4Q8NCT1 418 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 ADAM32Q8TC27 787 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 BORCS6Q96GS4 357 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 RABEP2Q9H5N1 569 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 ZSCAN5CA6NGD5 496 aaPredicted RBP12.42□□□□□ -0.42
LIN28A-201ENST00000254231 CLTAP09496 248 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 LMO2P25791 158 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 ZACNQ401N2 412 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 TIPINQ9BVW5 301 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 B3GNT5Q9BYG0 378 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 DPH5Q9H2P9 285 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 C10orf88Q9H8K7 445 aa12.42□□□□□ -0.42
LIN28A-201ENST00000254231 NGRNQ9NPE2 291 aaKnown RBP12.42□□□□□ -0.42
LIN28A-201ENST00000254231 DDX20Q9UHI6 824 aaKnown RBP12.42□□□□□ -0.42
LIN28A-201ENST00000254231 TULP2O00295 520 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 ITGA4P13612 1032 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 CCDC130P13994 396 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 NDST1P52848 882 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 BRSK2Q8IWQ3 736 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 SCUBE3Q8IX30 993 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 FAM193BQ96PV7 902 aaPredicted RBP12.41□□□□□ -0.42
LIN28A-201ENST00000254231 KATNAL1Q9BW62 490 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 RHOBTB2Q9BYZ6 727 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 DPEP3Q9H4B8 488 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 IPPQ9Y573 584 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 ERICH4A6NGS2 130 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 ASAP2O43150 1006 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 SCP2P22307 547 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 HOXA11P31270 313 aaPredicted RBP12.41□□□□□ -0.42
LIN28A-201ENST00000254231 SLC27A1Q6PCB7 646 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 FAM228AQ86W67 206 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 CCDC170Q8IYT3 715 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 SLC17A8Q8NDX2 589 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms