RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SLC1A1P43005 524 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 EFHC1Q5JVL4 640 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 C17orf50Q8WW18 174 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 STRBPQ96SI9 672 aaKnown RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 ZNF184Q99676 751 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 NRBP2Q9NSY0 501 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 MAGEA4P43358 317 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 MTTPP55157 894 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 BCAR1P56945 870 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 C6orf10Q5SRN2 563 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 TRAPPC11Q7Z392 1133 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 CAPSLQ8WWF8 208 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 LRRC4Q9HBW1 653 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SLC9A2Q9UBY0 812 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 CPSF3Q9UKF6 684 aaKnown RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SPATA2Q9UM82 520 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 COL15A1P39059 1388 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 LINC00854A0A1B0GVQ3 168 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SRGAP2CP0DJJ0 459 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 HADHAP40939 763 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 TFAMQ00059 246 aaKnown RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SURF1Q15526 300 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 RGS21Q2M5E4 152 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 ARL13BQ3SXY8 428 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 HEATR6Q6AI08 1181 aaKnown RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 LRRC74BQ6ZQY2 392 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SMIM5Q71RC9 77 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 OR8H2Q8N162 312 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 AIPL1Q9NZN9 384 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 STK39Q9UEW8 545 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 GRID1Q9ULK0 1009 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 PTPRUQ92729 1446 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 PNMA8CA0A1B0GUJ8 204 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SMIM31A0A1B0GVY4 71 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 KANSL1LA0AUZ9 987 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SARSP49591 514 aaKnown RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 KLHL12Q53G59 568 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 CLVS1Q8IUQ0 354 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 CDKL3Q8IVW4 592 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 BBS7Q8IWZ6 715 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 METTL13Q8N6R0 699 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SLC7A3Q8WY07 619 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 RMND5BQ96G75 393 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 SEL1LQ9UBV2 794 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 MINPP1Q9UNW1 487 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 FAM32AQ9Y421 112 aaKnown RBP13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 MEIS1O00470 390 aa13.77□□□□□ -0.2
PCDHGA3-201ENST00000253812 THRAP10827 490 aa13.77□□□□□ -0.2
PCDHGA3-201ENST00000253812 NUDT2P50583 147 aa13.77□□□□□ -0.2
PCDHGA3-201ENST00000253812 ABCB5Q2M3G0 1257 aa13.77□□□□□ -0.2
PCDHGA3-201ENST00000253812 SPICE1Q8N0Z3 855 aa13.77□□□□□ -0.2
PCDHGA3-201ENST00000253812 TRIM45Q9H8W5 580 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA3-201ENST00000253812 RAB21Q9UL25 225 aa13.77□□□□□ -0.2
PCDHGA3-201ENST00000253812 CDYLQ9Y232 598 aa13.77□□□□□ -0.2
PCDHGA3-201ENST00000253812 FNDC3AQ9Y2H6 1198 aaKnown RBP13.77□□□□□ -0.2
PCDHGA3-201ENST00000253812 OSBPP22059 807 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 ARPC4P59998 168 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 KCNMA1Q12791 1236 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 PTK7Q13308 1070 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 P3H1Q32P28 736 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 TAS2R42Q7RTR8 314 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 METTL16Q86W50 562 aaKnown RBP13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 LRRC6Q86X45 466 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 SERPINB13Q9UIV8 391 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 TUBE1Q9UJT0 475 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 PCDHGB4Q9UN71 923 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 PRR23AA6NEV1 266 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 RAD17O75943 681 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 PRLRP16471 622 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 TTKP33981 857 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 STK4Q13043 487 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 CDO1Q16878 200 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 TMEM63BQ5T3F8 832 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 PASD1Q8IV76 773 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 ADAM33Q9BZ11 813 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 SMARCAL1Q9NZC9 954 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 SNX13Q9Y5W8 968 aa13.77□□□□□ -0.21
PCDHGA3-201ENST00000253812 RNF103O00237 685 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 ALAS1P13196 640 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 ELF3P78545 371 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 ZBTB49Q6ZSB9 765 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 CERKQ8TCT0 537 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 ANKS1AQ92625 1134 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 GJB4Q9NTQ9 266 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 SH3GLB1Q9Y371 365 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 PRDX5P30044 214 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 NSUN2Q08J23 767 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 LBRQ14739 615 aaKnown RBP13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 TRIM72Q6ZMU5 477 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 PARD3BQ8TEW8 1205 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 CAVIN3Q969G5 261 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 BHMT2Q9H2M3 363 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 EFCAB1Q9HAE3 211 aa13.76□□□□□ -0.21
PCDHGA3-201ENST00000253812 RNPEPL1Q9HAU8 725 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms