RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GRID2IPA4D2P6 1211 aa16.27■□□□□ 0.2
HDHD3-201ENST00000238379 GNA15P30679 374 aa16.27■□□□□ 0.2
HDHD3-201ENST00000238379 NFX1Q12986 1120 aaKnown RBP16.27■□□□□ 0.2
HDHD3-201ENST00000238379 IFI16Q16666 785 aaKnown RBP16.27■□□□□ 0.2
HDHD3-201ENST00000238379 ARRDC4Q8NCT1 418 aa16.27■□□□□ 0.2
HDHD3-201ENST00000238379 ARHGEF26Q96DR7 871 aa16.27■□□□□ 0.2
HDHD3-201ENST00000238379 CARD6Q9BX69 1037 aa16.27■□□□□ 0.2
HDHD3-201ENST00000238379 CHST12Q9NRB3 414 aa16.27■□□□□ 0.2
HDHD3-201ENST00000238379 NOD1Q9Y239 953 aa16.27■□□□□ 0.2
HDHD3-201ENST00000238379 GPR182O15218 404 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 UNGP13051 313 aaPredicted RBP16.26■□□□□ 0.19
HDHD3-201ENST00000238379 KCNE1P15382 129 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 NOP2P46087 812 aaKnown RBP16.26■□□□□ 0.19
HDHD3-201ENST00000238379 TCEAL1Q15170 157 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 CLEC16AQ2KHT3 1053 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 FAM26DQ5JW98 314 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 FBXO47Q5MNV8 452 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 ACAD10Q6JQN1 1059 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 LRRC57Q8N9N7 239 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 TPCN2Q8NHX9 752 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 SLC35G2Q8TBE7 412 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 TSPAN18Q96SJ8 248 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 SDCBP2Q9H190 292 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 ERVK-5Q9HDB9 667 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 KLK14Q9P0G3 267 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 TUBGCP4Q9UGJ1 667 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 PARP2Q9UGN5 583 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 SAR1BQ9Y6B6 198 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 FRMPD3Q5JV73 1810 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 SMIM28A0A1B0GU29 152 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 TFRCP02786 760 aaKnown RBP16.26■□□□□ 0.19
HDHD3-201ENST00000238379 CYP1A1P04798 512 aaPredicted RBP16.26■□□□□ 0.19
HDHD3-201ENST00000238379 YWHAEP62258 255 aaKnown RBP16.26■□□□□ 0.19
HDHD3-201ENST00000238379 BEST2Q8NFU1 509 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 C18orf25Q96B23 403 aaPredicted RBP16.26■□□□□ 0.19
HDHD3-201ENST00000238379 BEGAINQ9BUH8 593 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 TLR10Q9BXR5 811 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 SMYD3Q9H7B4 428 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 OSGEPQ9NPF4 335 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 SNX12Q9UMY4 172 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 PHF24Q9UPV7 400 aa16.26■□□□□ 0.19
HDHD3-201ENST00000238379 CFHP08603 1231 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 PRLRP16471 622 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 RAP1GAPP47736 663 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 CDH8P55286 799 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 GPC5P78333 572 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 ZNF394Q53GI3 561 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 ZNF606Q8WXB4 792 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 TSC1Q92574 1164 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 UNC93B1Q9H1C4 597 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 TRPV6Q9H1D0 765 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 CYP3A43Q9HB55 503 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 STARD7Q9NQZ5 370 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 PADI3Q9ULW8 664 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 UBQLN1Q9UMX0 589 aaKnown RBP16.25■□□□□ 0.19
HDHD3-201ENST00000238379 PTPN22Q9Y2R2 807 aa16.25■□□□□ 0.19
HDHD3-201ENST00000238379 PPEF2O14830 753 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 THAP12O43422 761 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 SRGAP2O75044 1071 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 GHRP10912 638 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 P4HA1P13674 534 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 CD52P31358 61 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 HADHBP55084 474 aaKnown RBP16.24■□□□□ 0.19
HDHD3-201ENST00000238379 LPIN1Q14693 890 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 WHAMMP3Q1A5X7 153 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 MEI1Q5TIA1 1274 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 TRIM72Q6ZMU5 477 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 SLFN11Q7Z7L1 901 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 RHOT2Q8IXI1 618 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 CYFIP2Q96F07 1278 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 ZSWIM1Q9BR11 485 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 FAM105AQ9NUU6 356 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 COG5Q9UP83 839 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 A0A0U1RQG5 324 aaPredicted RBP16.24■□□□□ 0.19
HDHD3-201ENST00000238379 NCK2O43639 380 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 CAND2O75155 1236 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 FTCDO95954 541 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 ZNF618Q5T7W0 954 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 LRRC52Q8N7C0 313 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 MNS1Q8NEH6 495 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 WHAMMQ8TF30 809 aa16.24■□□□□ 0.19
HDHD3-201ENST00000238379 PAK6Q9NQU5 681 aaPredicted RBP16.24■□□□□ 0.19
HDHD3-201ENST00000238379 PDCD11Q14690 1871 aaKnown RBP16.23■□□□□ 0.19
HDHD3-201ENST00000238379 KBTBD13C9JR72 458 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 ARVCFO00192 962 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 DYNC1I1O14576 645 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 CILPO75339 1184 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 TADA3O75528 432 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 CD4P01730 458 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 CYP1A2P05177 515 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 RAD23BP54727 409 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 NOMO3P69849 1222 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 CENPCQ03188 943 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 MYO1EQ12965 1108 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 DSC3Q14574 896 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 NAA30Q147X3 362 aaPredicted RBP16.23■□□□□ 0.19
HDHD3-201ENST00000238379 NAA35Q5VZE5 725 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 C9orf57Q5W0N0 161 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms