RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 PPP3CBP16298 524 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 KELP23276 732 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 TUBA4AP68366 448 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 ZNF844Q08AG5 666 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 DHCR24Q15392 516 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 C11orf87Q6NUJ2 197 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 KCNK18Q7Z418 384 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 ZGPATQ8N5A5 531 aaKnown RBP3.75□□□□□ -1.81
CDKN3-201ENST00000216414 CAMKK1Q8N5S9 505 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 B3GALNT2Q8NCR0 500 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 SEMA6DQ8NFY4 1073 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 NLGN4YQ8NFZ3 816 aaPredicted RBP3.75□□□□□ -1.81
CDKN3-201ENST00000216414 LMBR1Q8WVP7 490 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 C11orf54Q9H0W9 315 aaPredicted RBP3.75□□□□□ -1.81
CDKN3-201ENST00000216414 APOBEC2Q9Y235 224 aaKnown RBP3.75□□□□□ -1.81
CDKN3-201ENST00000216414 NR2E3Q9Y5X4 410 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 MYBBP1AQ9BQG0 1328 aaKnown RBP3.74□□□□□ -1.81
CDKN3-201ENST00000216414 A0A087X0B3 334 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 GCOM1H8Y6P7 765 aaPredicted RBP3.74□□□□□ -1.81
CDKN3-201ENST00000216414 TRIM38O00635 465 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 KCNAB3O43448 404 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 ZEB2O60315 1214 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 AGFG2O95081 481 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 TTLL1O95922 423 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 EPHB2P29323 1055 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 SSBP2P81877 361 aaPredicted RBP3.74□□□□□ -1.81
CDKN3-201ENST00000216414 TFF2Q03403 129 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 MGAT2Q10469 447 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 STRN3Q13033 797 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 ADGRG5Q8IZF4 528 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 SNX19Q92543 992 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 ZNF48Q96MX3 618 aaPredicted RBP3.74□□□□□ -1.81
CDKN3-201ENST00000216414 DNAJC28Q9NX36 388 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 MAPRE3Q9UPY8 281 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 NEU2Q9Y3R4 380 aa3.74□□□□□ -1.81
CDKN3-201ENST00000216414 URI1O94763 535 aaPredicted RBP3.73□□□□□ -1.81
CDKN3-201ENST00000216414 OSMP13725 252 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 MPGP29372 298 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 SLC6A4P31645 630 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 CCT4P50991 539 aaKnown RBP3.73□□□□□ -1.81
CDKN3-201ENST00000216414 SLC5A3P53794 718 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 MC2RQ01718 297 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 DYRK1AQ13627 763 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 DACT2Q5SW24 774 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 UTP14CQ5TAP6 766 aaKnown RBP3.73□□□□□ -1.81
CDKN3-201ENST00000216414 SLC9A4Q6AI14 798 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 DDX46Q7L014 1031 aaKnown RBP3.73□□□□□ -1.81
CDKN3-201ENST00000216414 NSUN7Q8NE18 718 aaKnown RBP3.73□□□□□ -1.81
CDKN3-201ENST00000216414 OR2I1PQ8NGU4 316 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 SPATA3Q8NHX4 192 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 BHMT2Q9H2M3 363 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 VSX1Q9NZR4 365 aaPredicted RBP3.73□□□□□ -1.81
CDKN3-201ENST00000216414 CTTNBP2NLQ9P2B4 639 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 TBC1D30Q9Y2I9 924 aa3.73□□□□□ -1.81
CDKN3-201ENST00000216414 CCDC195A0A1B0GUA6 201 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 VWC2LB2RUY7 222 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 HNRNPCP07910 306 aaKnown RBP eCLIP3.72□□□□□ -1.81
CDKN3-201ENST00000216414 EBLN1P0CF75 366 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 NR2F6P10588 404 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 CCT8P50990 548 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 ANXA11P50995 505 aaKnown RBP3.72□□□□□ -1.81
CDKN3-201ENST00000216414 HNRNPMP52272 730 aaKnown RBP eCLIP3.72□□□□□ -1.81
CDKN3-201ENST00000216414 NXPH1P58417 271 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 CTXN1P60606 82 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 ATP8B2P98198 1209 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 ITIH3Q06033 890 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 FHL1Q13642 323 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 RHOT1Q8IXI2 618 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 DCBLD1Q8N8Z6 715 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 DENND1AQ8TEH3 1009 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 RAB24Q969Q5 203 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 ORAI2Q96SN7 254 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 C7orf25Q9BPX7 421 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 SEMA4CQ9C0C4 833 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 KLC4Q9NSK0 619 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 SERGEFQ9UGK8 458 aa3.72□□□□□ -1.81
CDKN3-201ENST00000216414 MRPL42Q9Y6G3 142 aaKnown RBP3.72□□□□□ -1.81
CDKN3-201ENST00000216414 CNTNAP2Q9UHC6 1331 aa3.71□□□□□ -1.81
CDKN3-201ENST00000216414 GRM6O15303 877 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 SUN1O94901 812 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 SBK3P0C264 359 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 DRD4P21917 467 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 MORN5Q5VZ52 161 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 YTHDF3Q7Z739 585 aaKnown RBP3.71□□□□□ -1.82
CDKN3-201ENST00000216414 NEK8Q86SG6 692 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 FBXO41Q8TF61 875 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 DPF2Q92785 391 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 TMX3Q96JJ7 454 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 PBKQ96KB5 322 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 KLHL32Q96NJ5 620 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 IMPG2Q9BZV3 1241 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 VTA1Q9NP79 307 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 C14orf119Q9NWQ9 140 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 BTBD3Q9Y2F9 522 aa3.71□□□□□ -1.82
CDKN3-201ENST00000216414 ADGRA2Q96PE1 1338 aa3.7□□□□□ -1.82
CDKN3-201ENST00000216414 WDR27A2RRH5 827 aa3.7□□□□□ -1.82
CDKN3-201ENST00000216414 TARM1B6A8C7 271 aa3.7□□□□□ -1.82
CDKN3-201ENST00000216414 MOSPD3O75425 235 aa3.7□□□□□ -1.82
CDKN3-201ENST00000216414 CD1AP06126 327 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms