RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 AfdnQ9QZQ1 1820 aaKnown RBP13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Myh15E9Q264 1925 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Gm5689F6Y2A6 97 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Sptlc1O35704 473 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Aff1O88573 1216 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 PtpraP18052 829 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Kcnn2P58390 839 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Eif3eP60229 445 aaKnown RBP13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Gucy2gQ6TL19 1100 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Ccdc159Q8C963 411 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Zfp64Q99KE8 643 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Polr3eQ9CZT4 710 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Mrpl4Q9DCU6 294 aaKnown RBP13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Dnajc12Q9R022 198 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Tnks1bp1P58871 1720 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Gm21973F6WEZ7 68 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 BhmtO35490 407 aaKnown RBP13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Cdc25cP48967 447 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 ItkQ03526 625 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Tmem120bQ3TA38 339 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gdpd4Q3TT99 632 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Agxt2Q3UEG6 513 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Tcf12Q61286 706 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 DcakdQ8BHC4 231 aaKnown RBP13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Tmem132cQ8CEF9 1099 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 OgtQ8CGY8 1046 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Olfr1499Q8VG65 314 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Krt5Q922U2 580 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Slc39a3Q99K24 317 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Q9CYI0 393 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Tmem79Q9D709 391 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Dkc1Q9ESX5 509 aaKnown RBP13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Grk1Q9WVL4 564 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Wnk3Q80XP9 1757 aa13.96□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Itpripl1A2ASA8 547 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Timm44O35857 452 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Il2rbP16297 539 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Wfs1P56695 890 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Emc10Q3TAS6 258 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Atxn7l3bQ3UD01 97 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ppp1r12cQ3UMT1 782 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ndufaf2Q59J78 168 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Foxn1Q61575 648 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Rd3Q8BRE0 195 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Taf12Q8VE65 161 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ankef1Q9D2J7 775 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Rps6ka2Q9WUT3 733 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Crlf3Q9Z2L7 442 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Olfr1354E9Q5G9 310 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Casp8O89110 480 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Sycp3P70281 254 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Taf1bP97358 586 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 MyrflQ3UN70 904 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gpd2Q64521 727 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Styk1Q6J9G1 429 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Rnaseh2bQ80ZV0 308 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Chmp2bQ8BJF9 213 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Cdk5rap3Q99LM2 503 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ubxn6Q99PL6 442 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Nup62clA2AG10 272 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 6030498E09RikB1AX85 169 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 PtenO08586 403 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Krt10P02535 570 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Psmc4P54775 418 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Uchl4P58321 233 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Arl4cP61208 192 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Olfr1415Q7TQS4 311 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Olfr1416Q8VGU4 312 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Rassf3Q99P51 232 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ddx56Q9D0R4 546 aaKnown RBP13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 ErmapQ9JLN5 566 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Peak1Q69Z38 1735 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Hsf3D0VYS2 492 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gm3460E9QAI8 215 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Slc1a1P51906 523 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Mybl1P51960 751 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Sem1P60897 70 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Rab6bP61294 208 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gtf2bP62915 316 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 GclcP97494 637 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 RelaQ04207 549 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Zbtb16Q3UQ17 673 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 SkiQ60698 725 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 LbpQ61805 481 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Tcaf3Q6QR59 914 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Zfp454Q80Y34 536 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Tmem161bQ8C2L6 487 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Mrps5Q99N87 432 aaKnown RBP13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Vta1Q9CR26 309 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Prpf4Q9DAW6 521 aaKnown RBP13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 EmcnQ9R0H2 261 aa13.95□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Myh7Q91Z83 1935 aa13.94□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Cdr1E9Q0B4 517 aa13.94□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Magea4F2Z493 315 aa13.94□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Dsg3O35902 993 aa13.94□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Stmn2P55821 179 aa13.94□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ugt1a2P70691 533 aa13.94□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 EnahQ03173 802 aa13.94□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Rnf10Q3UIW5 804 aa13.94□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Zbtb8osQ505B7 168 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms