RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Dgcr8Q9EQM6 773 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Sgk1Q9WVC6 431 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Lrrc63A6H694 637 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Vwa5b1A9Z1V5 1215 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gm6583E9Q8Z1 469 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Zfp275G3X904 499 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Capn6O35646 641 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Eef1bO70251 225 aaKnown RBP10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 MycnP03966 462 aaKnown RBP10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 VdrP48281 422 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Fdxacb1Q3UY23 622 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Sh3rf1Q69ZI1 892 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 C2cd5Q7TPS5 1016 aaKnown RBP10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Znf879Q8BI99 563 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Trmt13Q8BYH3 481 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Acot11Q8VHQ9 594 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rpn1Q91YQ5 608 aaKnown RBP10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Mfsd5Q921Y4 450 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Cib2Q9Z309 187 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Lamb2Q61292 1799 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 FscbA1EGX6 1074 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pde1bQ01065 535 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Lgr6Q3UVD5 967 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Fbxl5Q8C2S5 690 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Angel1Q8VCU0 667 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Lars2Q8VDC0 902 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nt5c1bQ91YE9 573 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 NelfcdQ922L6 591 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Bzw1Q9CQC6 419 aaKnown RBP10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ankef1Q9D2J7 775 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Clcn2Q9R0A1 908 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Anapc7Q9WVM3 565 aa10.35□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Mocs3A2BDX3 460 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Olfr310B2RVZ1 332 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 TroapB7ZNG4 668 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Fgf15O35622 218 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tnfrsf18O35714 228 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 GnazO70443 355 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Sstr1P30873 391 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Cav1P49817 178 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nub1P54729 614 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Yy1Q00899 414 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tab3Q571K4 716 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gm4952Q5FW57 296 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ssxb5Q6XAS2 159 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 PimregQ8BFY7 231 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Hdac9Q99N13 588 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 PnkpQ9JLV6 522 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Zfp612A0A1D5RMC2 672 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 AspgA0JNU3 564 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Itpripl1A2ASA8 547 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Lonrf1D3YY23 762 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ccdc6D3YZP9 469 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Lrrc10bG3XA50 292 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rpl21O09167 160 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 PrkceP16054 737 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Aimp1P31230 310 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Hoxc13P50207 328 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 St3gal1P54751 337 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Uchl4P58321 233 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 EnahQ03173 802 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tff2Q03404 129 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ccdc110Q3V125 848 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gm13103Q4VAD2 491 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ddx42Q810A7 929 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Trpa1Q8BLA8 1125 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Znf76Q8BMU0 568 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Dnali1Q8BVN8 258 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Cabs1Q8C633 391 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ago2Q8CJG0 860 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Plekhh3Q8VCE9 796 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rhobtb2Q91V93 728 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rev1Q920Q2 1249 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Adrm1Q9JKV1 407 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 XkQ9QXY7 446 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ambra1A2AH22 1300 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Spata31d1aE9QA35 1336 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Cntnap1O54991 1385 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 2210011C24RikA0A087WQ89 206 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Apba3O88888 571 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 SnrpfP62307 86 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 NfiaQ02780 532 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Kmt5aQ2YDW7 349 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ifnl2Q4VK74 193 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Stip1Q60864 543 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Psen2Q61144 448 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tgoln2Q62314 363 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Atl2Q6PA06 583 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Dzip3Q7TPV2 1204 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Acbd3Q8BMP6 525 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Foxp3Q99JB6 429 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Mettl16Q9CQG2 553 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pcsk1nQ9QXV0 258 aa10.34□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Chil3O35744 398 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 GabpaQ00422 454 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Zbtb14Q08376 449 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pdlim7Q3TJD7 457 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tmem65Q4VAE3 234 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Camta2Q80Y50 1208 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Slitrk1Q810C1 696 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms