RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Slc15a5Q8CBB2 566 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Atp11cQ9QZW0 1129 aa11.18□□□□□ -0.62
Limch1-201ENSMUST00000038188 Sh2d4bA6X942 431 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rfc1P35601 1131 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Znf784Q8BI69 297 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Lamtor4Q8CF66 99 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm42417Q8K1D0 126 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Q922C1 641 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 NapgQ9CWZ7 312 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Shank2Q80Z38 1476 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Clk2O35491 499 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Krt10P02535 570 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ercc5P35689 1170 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Hsd17b4P51660 735 aaKnown RBP11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Znf800Q0VEE6 662 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Abi3bpQ59IW6 1179 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ppme1Q8BVQ5 386 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 EtnpplQ8BWU8 499 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Thop1Q8C1A5 687 aaKnown RBP11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 AasdhpptQ9CQF6 309 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 1700123K08RikQ9D991 295 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Samsn1P57725 372 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Krt26Q3TRJ4 462 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Vps51Q3UVL4 782 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tcf12Q61286 706 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ubxn10Q8BG34 277 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Npas4Q8BGD7 802 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Mamdc2Q8CG85 686 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Reep2Q8VCD6 254 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Psip1Q99JF8 528 aaKnown RBP11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Cylc2B1AWN8 422 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm6121L7MUF1 212 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ppp2r5eQ61151 467 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Znf148Q61624 794 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 S100a15aQ6S5I3 108 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Bank1Q80VH0 783 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nup153E9Q3G8 1462 aaKnown RBP11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Slc23a4A0A0J9YUX7 615 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 CremP27699 357 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Skap2Q3UND0 358 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nxf2Q4ZGD8 691 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pcdh19Q80TF3 1145 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Adnp2Q8CHC8 1165 aaKnown RBP11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Olfr697Q8VFM4 317 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Sec13Q9D1M0 322 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Sapcd2Q9D818 391 aa11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 Habp4Q9JKS5 411 aaKnown RBP11.17□□□□□ -0.62
Limch1-201ENSMUST00000038188 1700031M16RikA0A087WSH0 82 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm14525B1AZA0 212 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm2012B1B0R1 212 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm14819Q62478 212 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ddx41Q91VN6 622 aaKnown RBP11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Marc1Q9CW42 340 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Drap1Q9D6N5 205 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nme3Q9WV85 169 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Cd97Q9Z0M6 818 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm5580A0A0N4SVP8 411 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm8882E9Q7E4 283 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Stx7O70439 261 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 CopeO89079 308 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 PhbP67778 272 aaKnown RBP11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 RhocQ62159 193 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ticam2Q8BJQ4 232 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ankk1Q8BZ25 745 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Slc51aQ8R000 340 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pip4k2cQ91XU3 421 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 MbipQ99LQ1 341 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Exo5Q9CXP9 373 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Il18rapQ9Z2B1 614 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rasip1Q3U0S6 961 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 MtbpQ8BJS8 894 aaKnown RBP11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Olfr348Q8VGK3 313 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nek8Q91ZR4 698 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tom1l1Q923U0 474 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Dlgap1Q9D415 992 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Zfp984A2A7A2 547 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 PdynO35417 248 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 PtgdrP70263 357 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fam92bQ3V2J0 292 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Stxbp5lQ5DQR4 1185 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Trmt13Q8BYH3 481 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Kremen2Q8K1S7 461 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Atat1Q8K341 421 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rin2Q9D684 903 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Spatc1lQ9D9W0 342 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Cbx6Q9DBY5 414 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Dnajb2Q9QYI5 324 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Eef2kO08796 724 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Atxn10P28658 475 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Smad1P70340 465 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tbc1d14Q8CGA2 694 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Q9D2Q3 444 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 IkbkeQ9R0T8 717 aa11.16□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ccdc149F6V035 524 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gabrr2P56476 465 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 SobpQ0P5V2 864 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ppp4r3cQ3V0Y1 813 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Actr5Q80US4 605 aaKnown RBP11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Impg2Q80XH2 1243 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ttc39bQ8BYY4 617 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms