RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Eif4e3Q9DBB5 207 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Cpb2Q9JHH6 422 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Psmg1Q9JK23 289 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Atp2c2A7L9Z8 944 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Rpl7aP12970 266 aaKnown RBP8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Mmp3P28862 477 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Irx2P81066 474 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Acvrl1Q61288 502 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ddx4Q61496 702 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Gcfc2Q8BKT3 769 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Lsm14bQ8CGC4 385 aaKnown RBP8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ccdc137Q8R0K4 290 aaKnown RBP8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Atp2a1Q8R429 994 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Slc5a4aQ9ET37 656 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 PlekQ9JHK5 350 aaKnown RBP8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Tnni1Q9WUZ5 187 aa8.3□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Gm28510A0A087WP28 240 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Apol7bB1AQP7 369 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Gm3371F7CQW8 167 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Tp53P02340 387 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ctnna1P26231 906 aaKnown RBP8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Cd86P42082 309 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Pde1bQ01065 535 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Sox8Q04886 464 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ptgs2Q05769 604 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 ZbbxQ0P5X5 716 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Cyp2j11Q3UNV2 504 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Apol7eQ3UZ24 369 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Foxd4Q60688 444 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Nr2e1Q64104 385 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Wscd1Q80XH4 572 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Klhl36Q8R124 613 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ap3m2Q8R2R9 418 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Oit3Q8R4V5 546 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ubxn6Q99PL6 442 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Med7Q9CZB6 233 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Cul2Q9D4H8 745 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Trim54Q9ERP3 366 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Cpsf3Q9QXK7 684 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Nr1h3Q9Z0Y9 445 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 NynrinQ5DTZ0 1840 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Trim5E9PV98 497 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Hsd17b1P51656 344 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ccr5P51682 354 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 AcrbpQ3V140 540 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Olfr389Q7TRX7 312 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ppm1eQ80TL0 749 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ankrd45Q810N6 248 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ttc7aQ8BGB2 858 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 EmsyQ8BMB0 1264 aaKnown RBP8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Sgip1Q8VD37 806 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Olfr385Q8VGT1 312 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Pcdha2Q91Y17 948 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ttc1Q91Z38 292 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Trim66Q924W6 1242 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Krt20Q9D312 431 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Scyl3Q9DBQ7 735 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 CtsfQ9R013 462 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Anapc7Q9WVM3 565 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Gm44511A0A0N4SW10 223 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ccnyl1D3YUJ3 367 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Casp14O89094 257 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 CcnoP0C242 352 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Klrb1bP27812 223 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ptk2P34152 1090 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Shmt1P50431 478 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Pi4k2aQ2TBE6 479 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Mpzl3Q3V3F6 237 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 OgdhQ60597 1023 aaKnown RBP8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Gja6Q6S5G4 283 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Taf2Q8C176 1104 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Gpc5Q8CAL5 572 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Actl9Q8CG27 415 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Cplx3Q8R1B5 158 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Gdap1l1Q8VE33 370 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ca9Q8VHB5 437 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Spns2Q91VM4 549 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Zfp623Q9CY99 499 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Mageb3Q9D2H4 330 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Capn9Q9D805 690 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Dnajb7Q9QYI8 312 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Angptl3Q9R182 455 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ggt5Q9Z2A9 573 aa8.29□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Skint7A7XV04 395 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Fam71aB7XG49 585 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 March10E9PX79 788 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 2610008E11RikG3X964 669 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Klra1P20937 262 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Morf4l1P60762 362 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 RalaP63321 206 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 PrkczQ02956 592 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 9130409I23RikQ3TS87 320 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Gm10488Q4KL05 212 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Efcab8Q8C9R9 203 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Rassf4Q8CB96 322 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Agbl2Q8CDK2 862 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Il17cQ8K4C5 194 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Vmn1r203Q8R273 311 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Gimap4Q99JY3 219 aa8.28□□□□□ -1.08
Ccdc39-201ENSMUST00000029222 Ino80bQ99PT3 375 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms