RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Sun1Q9D666 913 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rassf7Q9DD19 359 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sgpp1Q9JI99 430 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Trpm5Q9JJH7 1158 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ubr2Q6WKZ8 1755 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Scgb2b19J3QM75 112 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Serpina3kP07759 418 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Atg16l2Q6KAU8 623 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Slitrk2Q810C0 846 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ctdspl2Q8BG15 465 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Nup107Q8BH74 926 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Frmd4aQ8BIE6 1020 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cfap61Q8CEL2 1252 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Kat2bQ9JHD1 813 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Scgb2b12S4R2L0 112 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm5737A0A140LI11 423 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Qtrt2B8ZXI1 415 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pja1O55176 578 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Adam15O88839 864 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lmnb1P14733 588 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 ZufspQ3T9Z9 577 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Thoc7Q7TMY4 204 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rfx4Q7TNK1 735 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Suz12Q80U70 741 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fra10ac1Q8BP78 315 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ttc26Q8BS45 554 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mtmr4Q91XS1 1190 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mrfap1Q9CQL7 125 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Inpp4aQ9EPW0 939 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cdkl2Q9QUK0 568 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Krt16Q9Z2K1 469 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Plekhg4A0A1L1SU27 1217 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Phf11A6H5X4 337 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Hdgfl2Q3UMU9 669 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tbx2Q60707 711 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fam167aQ6P1G6 215 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Znf513Q6PD29 541 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Znf12Q7TSI0 686 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fbxo28Q8BIG4 368 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 GanQ8CA72 597 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cog3Q8CI04 820 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pold4Q9CWP8 107 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sugt1Q9CX34 336 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cap2Q9CYT6 476 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PyglQ9ET01 850 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lbhd1A0A087WPA0 259 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Slfn3A0A1L1STQ7 640 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ifit3bE9PV48 403 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Eno1P17182 434 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tmem165P52875 323 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 CidecP56198 239 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cab39Q06138 341 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fxr1Q61584 677 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sh3gl1Q62419 368 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lsm8Q6ZWM4 96 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pcdhgb4Q91XX6 912 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ugp2Q91ZJ5 508 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Trim8Q99PJ2 551 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ddx28Q9CWT6 540 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rmi1Q9D4G9 616 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ambra1A2AH22 1300 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Alppl2P24823 529 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Akap14Q3V0I7 536 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Myl6Q60605 151 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mapre1Q61166 268 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Smarca1Q6PGB8 1046 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Nipa1Q8BHK1 323 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mboat7Q8CHK3 473 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 E2f4Q8R0K9 410 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Stx11Q9D3G5 287 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Spata17Q9D552 379 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dmrtc1Q9D9R7 182 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 CsadQ9DBE0 493 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 XdhQ00519 1335 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 TriqkB2B9E1 86 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Olfr310B2RVZ1 332 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Farp1F8VPU2 1048 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Unc5cO08747 931 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fgd3O88842 733 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Psd3Q2PFD7 1037 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lrrc36Q3V0M2 755 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 WhammQ571B6 793 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Brsk2Q69Z98 735 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cyfip1Q7TMB8 1253 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tmem59lQ7TNI2 337 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Oscp1Q8BHW2 379 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Inpp5fQ8CDA1 1132 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tmem132cQ8CEF9 1099 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Appl2Q8K3G9 662 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Nxf1Q99JX7 618 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gimap4Q99JY3 219 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Efhc1Q9D9T8 648 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gadd45gQ9Z111 159 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mroh5E9PUJ8 762 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 4930579F01RikE9Q3L6 325 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 RargP18911 458 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cyp2d11P24457 504 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rbm46P86049 533 aa4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rnpc3Q3UZ01 514 aaKnown RBP4.77□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Oca2Q62052 833 aa4.77□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms