RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 TY1A-DR3Q12441 440 aa5.49□□□□□ -1.53
snR54snR54 PEP12P32854 288 aa5.48□□□□□ -1.53
snR54snR54 KTR7P40504 517 aa5.48□□□□□ -1.53
snR54snR54 HPF1Q05164 967 aa5.48□□□□□ -1.53
snR54snR54 SWI5P08153 709 aa5.47□□□□□ -1.53
snR54snR54 SLA1P32790 1244 aa5.47□□□□□ -1.53
snR54snR54 SUM1P46676 1062 aa5.47□□□□□ -1.53
snR54snR54 MSN5P52918 1224 aa5.47□□□□□ -1.53
snR54snR54 PDI1P17967 522 aaKnown RBP5.46□□□□□ -1.54
snR54snR54 YGR035CP53222 116 aa5.46□□□□□ -1.54
snR54snR54 ALA1P40825 983 aaKnown RBP5.45□□□□□ -1.54
snR54snR54 RPS6AP0CX37 236 aaKnown RBP5.44□□□□□ -1.54
snR54snR54 RPS6BP0CX38 236 aaPredicted RBP5.44□□□□□ -1.54
snR54snR54 NTH2P35172 780 aa5.44□□□□□ -1.54
snR54snR54 AHP1P38013 176 aaKnown RBP5.44□□□□□ -1.54
snR54snR54 JJJ2P46997 583 aa5.44□□□□□ -1.54
snR54snR54 SHM1P37292 490 aaPredicted RBP5.43□□□□□ -1.54
snR54snR54 YPQ2Q06328 317 aa5.43□□□□□ -1.54
snR54snR54 YFL034WP43564 1073 aa5.42□□□□□ -1.54
snR54snR54 UBP15P50101 1230 aa5.42□□□□□ -1.54
snR54snR54 ACS2P52910 683 aaKnown RBP5.42□□□□□ -1.54
snR54snR54 CUZ1P53899 274 aa5.42□□□□□ -1.54
snR54snR54 TSC13Q99190 310 aa5.42□□□□□ -1.54
snR54snR54 TRK2P28584 889 aa5.4□□□□□ -1.54
snR54snR54 IRE1P32361 1115 aa5.4□□□□□ -1.54
snR54snR54 TTI1P36097 1038 aa5.4□□□□□ -1.54
snR54snR54 PHO87P25360 923 aa5.39□□□□□ -1.55
snR54snR54 CPS1P27614 576 aa5.39□□□□□ -1.55
snR54snR54 CYT1P07143 309 aa5.38□□□□□ -1.55
snR54snR54 SIS2P36024 562 aa5.38□□□□□ -1.55
snR54snR54 TGL4P36165 910 aa5.38□□□□□ -1.55
snR54snR54 YNL165WP53891 406 aa5.38□□□□□ -1.55
snR54snR54 PSH1Q12161 406 aa5.38□□□□□ -1.55
snR54snR54 RPS31P05759 152 aaKnown RBP5.37□□□□□ -1.55
snR54snR54 GAL2P13181 574 aa5.37□□□□□ -1.55
snR54snR54 PDC6P26263 563 aaKnown RBP5.37□□□□□ -1.55
snR54snR54 JJJ3P47138 172 aa5.37□□□□□ -1.55
snR54snR54 LYS5P50113 272 aa5.37□□□□□ -1.55
snR54snR54 ROM1P53046 1155 aa5.37□□□□□ -1.55
snR54snR54 YMR265CQ03508 461 aaKnown RBP5.37□□□□□ -1.55
snR54snR54 HAP4P14064 554 aa5.36□□□□□ -1.55
snR54snR54 DIT1P21623 536 aa5.36□□□□□ -1.55
snR54snR54 CEM1P39525 442 aa5.36□□□□□ -1.55
snR54snR54 ECM23Q02710 187 aa5.36□□□□□ -1.55
snR54snR54 KRE33P53914 1056 aaKnown RBP5.35□□□□□ -1.55
snR54snR54 GAS4Q08271 471 aa5.35□□□□□ -1.55
snR54snR54 DPH6Q12429 685 aa5.35□□□□□ -1.55
snR54snR54 MCM1P11746 286 aa5.34□□□□□ -1.55
snR54snR54 MLF3P32047 452 aa5.34□□□□□ -1.55
snR54snR54 SYT1Q06836 1226 aa5.34□□□□□ -1.55
snR54snR54 MRPL16P38064 232 aa5.33□□□□□ -1.56
snR54snR54 ADE12P80210 433 aaKnown RBP5.33□□□□□ -1.56
snR54snR54 STB3Q12427 513 aa5.33□□□□□ -1.56
snR54snR54 Q0182Q9ZZW1 134 aa5.33□□□□□ -1.56
snR54snR54 UBP1P25037 809 aa5.32□□□□□ -1.56
snR54snR54 PUP1P25043 261 aa5.32□□□□□ -1.56
snR54snR54 UBX7P38349 436 aa5.32□□□□□ -1.56
snR54snR54 ALD2P47771 506 aa5.32□□□□□ -1.56
snR54snR54 YDR461C-AQ2V2P7 80 aa5.31□□□□□ -1.56
snR54snR54 LEU1P07264 779 aaKnown RBP5.3□□□□□ -1.56
snR54snR54 NGR1P32831 672 aaKnown RBP5.29□□□□□ -1.56
snR54snR54 MDJ1P35191 511 aa5.29□□□□□ -1.56
snR54snR54 YTA6P40328 754 aa5.29□□□□□ -1.56
snR54snR54 YML083CQ04526 418 aa5.29□□□□□ -1.56
snR54snR54 VAN1P23642 535 aa5.28□□□□□ -1.56
snR54snR54 FPS1P23900 669 aa5.28□□□□□ -1.56
snR54snR54 SUV3P32580 737 aa5.28□□□□□ -1.56
snR54snR54 HXT5P38695 592 aa5.28□□□□□ -1.56
snR54snR54 SPR3P41901 512 aa5.28□□□□□ -1.56
snR54snR54 MTO1P53070 669 aa5.27□□□□□ -1.57
snR54snR54 RGP1P16664 663 aa5.26□□□□□ -1.57
snR54snR54 SSA4P22202 642 aaKnown RBP5.26□□□□□ -1.57
snR54snR54 SCD5P34758 872 aa5.26□□□□□ -1.57
snR54snR54 NOB1Q08444 459 aaKnown RBP5.26□□□□□ -1.57
snR54snR54 FOX2Q02207 900 aaKnown RBP5.25□□□□□ -1.57
snR54snR54 CAB1Q04430 367 aa5.25□□□□□ -1.57
snR54snR54 THI72Q08579 599 aa5.25□□□□□ -1.57
snR54snR54 TRS33Q99394 268 aa5.25□□□□□ -1.57
snR54snR54 AI1P03875 834 aa5.24□□□□□ -1.57
snR54snR54 MSC7P38694 644 aa5.24□□□□□ -1.57
snR54snR54 SBE2P42223 864 aaKnown RBP5.24□□□□□ -1.57
snR54snR54 YFL066CP43538 392 aa5.24□□□□□ -1.57
snR54snR54 NSG2P53898 299 aa5.24□□□□□ -1.57
snR54snR54 UTP4Q06679 776 aaKnown RBP5.24□□□□□ -1.57
snR54snR54 GPM1P00950 247 aaKnown RBP5.23□□□□□ -1.57
snR54snR54 CWH41P53008 833 aa5.23□□□□□ -1.57
snR54snR54 TY1A-DR2Q03964 440 aaKnown RBP5.23□□□□□ -1.57
snR54snR54 QDR2P40474 542 aa5.22□□□□□ -1.57
snR54snR54 ALD4P46367 519 aaKnown RBP5.22□□□□□ -1.57
snR54snR54 CUS1Q02554 436 aaPredicted RBP5.22□□□□□ -1.57
snR54snR54 RLF2Q12495 606 aa5.22□□□□□ -1.57
snR54snR54 KAP122P32767 1081 aa5.21□□□□□ -1.58
snR54snR54 ICP55P40051 511 aa5.21□□□□□ -1.58
snR54snR54 PUN1Q06991 263 aa5.21□□□□□ -1.58
snR54snR54 PDC5P16467 563 aaKnown RBP5.2□□□□□ -1.58
snR54snR54 YBR197CP38306 217 aa5.2□□□□□ -1.58
snR54snR54 PHM7Q12252 991 aa5.2□□□□□ -1.58
snR54snR54 RPC31P17890 251 aa5.19□□□□□ -1.58
snR54snR54 MRPL33P20084 86 aa5.19□□□□□ -1.58
snR54snR54 TPS3P38426 1054 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms