RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W TY1B-PR2P0C2J0 1756 aa3.23□□□□□ -1.89
CTF4YPR135W TY1B-PR3P0C2J1 1755 aaKnown RBP3.23□□□□□ -1.89
CTF4YPR135W TY1B-JR1P47098 1755 aa3.23□□□□□ -1.89
CTF4YPR135W TY1B-ML2Q03434 1755 aaKnown RBP3.23□□□□□ -1.89
CTF4YPR135W TY1B-ER1Q03612 1755 aa3.23□□□□□ -1.89
CTF4YPR135W TY1B-ML1Q04711 1755 aaKnown RBP3.23□□□□□ -1.89
CTF4YPR135W TY1B-GR2Q12269 1755 aa3.23□□□□□ -1.89
CTF4YPR135W TY1B-OLQ12273 1755 aa3.23□□□□□ -1.89
CTF4YPR135W TY1B-PLQ12414 1755 aaKnown RBP3.23□□□□□ -1.89
CTF4YPR135W GLC3P32775 704 aa3.23□□□□□ -1.89
CTF4YPR135W FIG4P42837 879 aa3.23□□□□□ -1.89
CTF4YPR135W YPK9Q12697 1472 aa3.23□□□□□ -1.89
CTF4YPR135W ARG8P18544 423 aa3.23□□□□□ -1.89
CTF4YPR135W KTR1P27810 393 aaKnown RBP3.23□□□□□ -1.89
CTF4YPR135W LYS5P50113 272 aa3.23□□□□□ -1.89
CTF4YPR135W NAM8Q00539 523 aaKnown RBP3.23□□□□□ -1.89
CTF4YPR135W PHM7Q12252 991 aa3.23□□□□□ -1.89
CTF4YPR135W NTE1Q04958 1679 aa3.22□□□□□ -1.89
CTF4YPR135W JJJ3P47138 172 aa3.22□□□□□ -1.89
CTF4YPR135W NSG2P53898 299 aa3.22□□□□□ -1.89
CTF4YPR135W VPS15P22219 1454 aa3.21□□□□□ -1.9
CTF4YPR135W CDC19P00549 500 aaKnown RBP3.21□□□□□ -1.9
CTF4YPR135W TY2B-BQ12491 1770 aa3.21□□□□□ -1.9
CTF4YPR135W BDS1Q08347 646 aa3.21□□□□□ -1.9
CTF4YPR135W THI72Q08579 599 aa3.19□□□□□ -1.9
CTF4YPR135W TEC1P18412 486 aa3.18□□□□□ -1.9
CTF4YPR135W FBP26P32604 452 aa3.18□□□□□ -1.9
CTF4YPR135W YNR021WP53723 404 aaKnown RBP3.18□□□□□ -1.9
CTF4YPR135W TY1B-DR3Q99231 1755 aa3.17□□□□□ -1.9
CTF4YPR135W YFL066CP43538 392 aa3.17□□□□□ -1.9
CTF4YPR135W CUZ1P53899 274 aa3.17□□□□□ -1.9
CTF4YPR135W AI1P03875 834 aa3.17□□□□□ -1.9
CTF4YPR135W STE6P12866 1290 aa3.17□□□□□ -1.9
CTF4YPR135W PDR15Q04182 1529 aaKnown RBP3.17□□□□□ -1.9
CTF4YPR135W NRD1P53617 575 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
CTF4YPR135W YPR084WQ06821 456 aa3.17□□□□□ -1.9
CTF4YPR135W RAD59Q12223 238 aa3.17□□□□□ -1.9
CTF4YPR135W NUP159P40477 1460 aa3.17□□□□□ -1.9
CTF4YPR135W CEM1P39525 442 aa3.16□□□□□ -1.9
CTF4YPR135W CSN12P47130 423 aa3.16□□□□□ -1.9
CTF4YPR135W DOP1Q03921 1698 aa3.16□□□□□ -1.9
CTF4YPR135W CCT8P47079 568 aaKnown RBP3.16□□□□□ -1.9
CTF4YPR135W NUP170P38181 1502 aa3.15□□□□□ -1.9
CTF4YPR135W TRM732Q03496 1420 aa3.15□□□□□ -1.91
CTF4YPR135W VTC4P47075 721 aa3.15□□□□□ -1.91
CTF4YPR135W SPO14P36126 1683 aa3.14□□□□□ -1.91
CTF4YPR135W MMS22Q06164 1454 aa3.14□□□□□ -1.91
CTF4YPR135W RPO21P04050 1733 aaKnown RBP3.14□□□□□ -1.91
CTF4YPR135W TY1B-JR2P47100 1755 aaKnown RBP3.14□□□□□ -1.91
CTF4YPR135W TY1B-ER2Q03619 1755 aa3.14□□□□□ -1.91
CTF4YPR135W TY1B-MR1Q04214 1755 aa3.14□□□□□ -1.91
CTF4YPR135W TY1B-MR2Q04670 1755 aaKnown RBP3.14□□□□□ -1.91
CTF4YPR135W TY1B-LR1Q12088 1755 aaKnown RBP3.14□□□□□ -1.91
CTF4YPR135W TY1B-NL1Q12112 1755 aa3.14□□□□□ -1.91
CTF4YPR135W TY1B-GR1Q12141 1755 aa3.14□□□□□ -1.91
CTF4YPR135W TY1B-BLQ12490 1755 aa3.14□□□□□ -1.91
CTF4YPR135W ISU1Q03020 165 aa3.13□□□□□ -1.91
CTF4YPR135W ATG20Q07528 640 aa3.13□□□□□ -1.91
CTF4YPR135W YPR053CQ6Q5F3 151 aa3.13□□□□□ -1.91
CTF4YPR135W DLD3P39976 496 aaKnown RBP3.13□□□□□ -1.91
CTF4YPR135W YMR265CQ03508 461 aaKnown RBP3.13□□□□□ -1.91
CTF4YPR135W GUT2P32191 649 aa3.12□□□□□ -1.91
CTF4YPR135W DAL1P32375 460 aa3.12□□□□□ -1.91
CTF4YPR135W SBE2P42223 864 aaKnown RBP3.12□□□□□ -1.91
CTF4YPR135W AIM7Q12156 149 aa3.12□□□□□ -1.91
CTF4YPR135W TDA6Q06466 467 aa3.11□□□□□ -1.91
CTF4YPR135W SYT1Q06836 1226 aa3.11□□□□□ -1.91
CTF4YPR135W SBP1P10080 294 aaKnown RBP3.11□□□□□ -1.91
CTF4YPR135W ADE12P80210 433 aaKnown RBP3.11□□□□□ -1.91
CTF4YPR135W DIT1P21623 536 aa3.1□□□□□ -1.91
CTF4YPR135W UBP15P50101 1230 aa3.1□□□□□ -1.91
CTF4YPR135W KRE33P53914 1056 aaKnown RBP3.1□□□□□ -1.91
CTF4YPR135W DNF3Q12674 1656 aa3.1□□□□□ -1.91
CTF4YPR135W MAK16P10962 306 aaPredicted RBP3.1□□□□□ -1.91
CTF4YPR135W WTM2Q12206 467 aa3.1□□□□□ -1.91
CTF4YPR135W TY1A-DR3Q12441 440 aa3.1□□□□□ -1.91
CTF4YPR135W RPP2BP02400 110 aaKnown RBP3.09□□□□□ -1.91
CTF4YPR135W TOP2P06786 1428 aaKnown RBP3.09□□□□□ -1.91
CTF4YPR135W SLA1P32790 1244 aa3.09□□□□□ -1.92
CTF4YPR135W YMR187CQ03236 431 aa3.09□□□□□ -1.92
CTF4YPR135W STE20Q03497 939 aaKnown RBP3.08□□□□□ -1.92
CTF4YPR135W FRA1Q07825 749 aa3.08□□□□□ -1.92
CTF4YPR135W SSN3P39073 555 aa3.08□□□□□ -1.92
CTF4YPR135W YNR014WP53719 212 aa3.08□□□□□ -1.92
CTF4YPR135W DAT1P13483 248 aaKnown RBP3.07□□□□□ -1.92
CTF4YPR135W AHP1P38013 176 aaKnown RBP3.07□□□□□ -1.92
CTF4YPR135W MSN5P52918 1224 aa3.07□□□□□ -1.92
CTF4YPR135W YDR461C-AQ2V2P7 80 aa3.07□□□□□ -1.92
CTF4YPR135W ULS1Q08562 1619 aa3.07□□□□□ -1.92
CTF4YPR135W SKN7P38889 622 aa3.07□□□□□ -1.92
CTF4YPR135W ISR1Q06098 443 aaKnown RBP3.07□□□□□ -1.92
CTF4YPR135W TRM3Q07527 1436 aa3.07□□□□□ -1.92
CTF4YPR135W UTR2P32623 467 aa3.06□□□□□ -1.92
CTF4YPR135W NAF1P53919 492 aaKnown RBP3.06□□□□□ -1.92
CTF4YPR135W SNT2P53127 1403 aa3.06□□□□□ -1.92
CTF4YPR135W ISF1P32488 338 aa3.06□□□□□ -1.92
CTF4YPR135W UTP7P40055 554 aaKnown RBP3.06□□□□□ -1.92
CTF4YPR135W ARO1P08566 1588 aaKnown RBP3.05□□□□□ -1.92
CTF4YPR135W GPM1P00950 247 aaKnown RBP3.05□□□□□ -1.92
CTF4YPR135W SSA2P10592 639 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms