RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C ALD4P46367 519 aaKnown RBP3.45□□□□□ -1.86
ATG11YPR049C TFB4Q12004 338 aa3.45□□□□□ -1.86
ATG11YPR049C RRN7P40992 514 aa3.44□□□□□ -1.86
ATG11YPR049C RPN11P43588 306 aaKnown RBP3.44□□□□□ -1.86
ATG11YPR049C TYW1Q08960 810 aaKnown RBP3.44□□□□□ -1.86
ATG11YPR049C SSA4P22202 642 aaKnown RBP3.44□□□□□ -1.86
ATG11YPR049C IKI3Q06706 1349 aaKnown RBP3.44□□□□□ -1.86
ATG11YPR049C DIT2P21595 489 aa3.44□□□□□ -1.86
ATG11YPR049C SLI15P38283 698 aa3.44□□□□□ -1.86
ATG11YPR049C ETP1P38748 585 aaKnown RBP3.44□□□□□ -1.86
ATG11YPR049C LYS4P49367 693 aaPredicted RBP3.44□□□□□ -1.86
ATG11YPR049C KTR7P40504 517 aa3.43□□□□□ -1.86
ATG11YPR049C AI4P03878 556 aa3.43□□□□□ -1.86
ATG11YPR049C KEX2P13134 814 aa3.43□□□□□ -1.86
ATG11YPR049C FKH1P40466 484 aa3.43□□□□□ -1.86
ATG11YPR049C YNR021WP53723 404 aaKnown RBP3.43□□□□□ -1.86
ATG11YPR049C ESS1P22696 170 aa3.43□□□□□ -1.86
ATG11YPR049C COX6P00427 148 aa3.42□□□□□ -1.86
ATG11YPR049C CHL1P22516 861 aaPredicted RBP3.42□□□□□ -1.86
ATG11YPR049C MRF1P30775 413 aaPredicted RBP3.42□□□□□ -1.86
ATG11YPR049C PCS60P38137 543 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
ATG11YPR049C RPS9BP05755 195 aaKnown RBP3.41□□□□□ -1.86
ATG11YPR049C DMA2P53924 522 aa3.41□□□□□ -1.86
ATG11YPR049C MST1P07236 462 aa3.41□□□□□ -1.86
ATG11YPR049C ERT1P38140 529 aa3.41□□□□□ -1.86
ATG11YPR049C PRE3P38624 215 aa3.4□□□□□ -1.86
ATG11YPR049C DUS1P53759 423 aaKnown RBP3.4□□□□□ -1.86
ATG11YPR049C KIN4Q01919 800 aa3.4□□□□□ -1.86
ATG11YPR049C YPR204WQ08995 1032 aa3.4□□□□□ -1.86
ATG11YPR049C BCK2P33306 851 aa3.4□□□□□ -1.87
ATG11YPR049C HST3P53687 447 aa3.4□□□□□ -1.87
ATG11YPR049C PDR1P12383 1068 aa3.4□□□□□ -1.87
ATG11YPR049C MRX12P47084 519 aa3.39□□□□□ -1.87
ATG11YPR049C YML133CQ03099 1374 aa3.39□□□□□ -1.87
ATG11YPR049C YLL067CQ07888 1374 aa3.39□□□□□ -1.87
ATG11YPR049C DAT1P13483 248 aaKnown RBP3.39□□□□□ -1.87
ATG11YPR049C PRP5P21372 849 aaPredicted RBP3.39□□□□□ -1.87
ATG11YPR049C UTP22P53254 1237 aaPredicted RBP3.39□□□□□ -1.87
ATG11YPR049C DUR1,2P32528 1835 aaKnown RBP3.38□□□□□ -1.87
ATG11YPR049C YLR278CQ05854 1341 aa3.38□□□□□ -1.87
ATG11YPR049C IXR1P33417 597 aa3.38□□□□□ -1.87
ATG11YPR049C SLM3Q12093 417 aa3.38□□□□□ -1.87
ATG11YPR049C LEU3P08638 886 aa3.38□□□□□ -1.87
ATG11YPR049C SCJ1P25303 377 aa3.38□□□□□ -1.87
ATG11YPR049C IOC2Q12072 812 aa3.38□□□□□ -1.87
ATG11YPR049C SSM4P40318 1319 aa3.38□□□□□ -1.87
ATG11YPR049C PRT1P06103 763 aaKnown RBP3.37□□□□□ -1.87
ATG11YPR049C ALR1Q08269 859 aa3.37□□□□□ -1.87
ATG11YPR049C ILV3P39522 585 aaKnown RBP3.37□□□□□ -1.87
ATG11YPR049C PSE1P32337 1089 aaKnown RBP3.37□□□□□ -1.87
ATG11YPR049C DSF2P38213 736 aa3.37□□□□□ -1.87
ATG11YPR049C MSB3P48566 633 aaPredicted RBP3.37□□□□□ -1.87
ATG11YPR049C LYS2P07702 1392 aa3.36□□□□□ -1.87
ATG11YPR049C TBS1P38114 1094 aa3.36□□□□□ -1.87
ATG11YPR049C LEO1P38439 464 aa3.36□□□□□ -1.87
ATG11YPR049C GAR1P28007 205 aaKnown RBP3.36□□□□□ -1.87
ATG11YPR049C RPP2BP02400 110 aaKnown RBP3.35□□□□□ -1.87
ATG11YPR049C CTT1P06115 562 aa3.35□□□□□ -1.87
ATG11YPR049C FPK1P53739 893 aa3.35□□□□□ -1.87
ATG11YPR049C GCR2Q01722 534 aa3.35□□□□□ -1.87
ATG11YPR049C AIR2Q12476 344 aaKnown RBP3.35□□□□□ -1.87
ATG11YPR049C RAD4P14736 754 aa3.35□□□□□ -1.87
ATG11YPR049C YDL206WQ12424 762 aa3.35□□□□□ -1.87
ATG11YPR049C ARH1P48360 493 aa3.35□□□□□ -1.87
ATG11YPR049C ALD3P54114 506 aa3.35□□□□□ -1.87
ATG11YPR049C YPR148CQ06523 435 aa3.35□□□□□ -1.87
ATG11YPR049C RPL34AP87262 121 aaPredicted RBP3.34□□□□□ -1.87
ATG11YPR049C CAB1Q04430 367 aa3.34□□□□□ -1.87
ATG11YPR049C TCB1Q12466 1186 aa3.34□□□□□ -1.87
ATG11YPR049C PRP45P28004 379 aaPredicted RBP3.33□□□□□ -1.88
ATG11YPR049C PRP40P33203 583 aaKnown RBP3.33□□□□□ -1.88
ATG11YPR049C RAM1P22007 431 aa3.33□□□□□ -1.88
ATG11YPR049C UGA3P26370 528 aa3.33□□□□□ -1.88
ATG11YPR049C MAC1P35192 417 aa3.33□□□□□ -1.88
ATG11YPR049C ALA1P40825 983 aaKnown RBP3.33□□□□□ -1.88
ATG11YPR049C ISM1P48526 1002 aa3.33□□□□□ -1.88
ATG11YPR049C YNL115CP53925 644 aa3.33□□□□□ -1.88
ATG11YPR049C PPH3P32345 308 aa3.33□□□□□ -1.88
ATG11YPR049C DLD3P39976 496 aaKnown RBP3.33□□□□□ -1.88
ATG11YPR049C ATG3P40344 310 aa3.33□□□□□ -1.88
ATG11YPR049C PUS6P53294 404 aa3.33□□□□□ -1.88
ATG11YPR049C EAF6P47128 113 aa3.32□□□□□ -1.88
ATG11YPR049C BNI4P53858 892 aa3.32□□□□□ -1.88
ATG11YPR049C TFB3Q03290 321 aa3.32□□□□□ -1.88
ATG11YPR049C RPO41P13433 1351 aaKnown RBP3.32□□□□□ -1.88
ATG11YPR049C COBP00163 385 aa3.32□□□□□ -1.88
ATG11YPR049C DPS1P04802 557 aaKnown RBP3.32□□□□□ -1.88
ATG11YPR049C YKL222CP35995 705 aa3.32□□□□□ -1.88
ATG11YPR049C MVP1P40959 511 aaKnown RBP3.32□□□□□ -1.88
ATG11YPR049C YNL108CP53929 270 aa3.32□□□□□ -1.88
ATG11YPR049C YRF1-4O13559 1382 aa3.31□□□□□ -1.88
ATG11YPR049C LAM6Q08001 693 aa3.31□□□□□ -1.88
ATG11YPR049C SAS10Q12136 610 aaPredicted RBP3.31□□□□□ -1.88
ATG11YPR049C TRM1P15565 570 aaKnown RBP3.31□□□□□ -1.88
ATG11YPR049C SOL3P38858 249 aa3.31□□□□□ -1.88
ATG11YPR049C RGR1P19263 1082 aa3.31□□□□□ -1.88
ATG11YPR049C YJU3P28321 313 aa3.3□□□□□ -1.88
ATG11YPR049C NAB2P32505 525 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
ATG11YPR049C RAD59Q12223 238 aa3.3□□□□□ -1.88
ATG11YPR049C AIM7Q12156 149 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 127.5 ms