RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W MDS3P53094 1487 aa2.52□□□□□ -2.01
RTP1YMR185W TEC1P18412 486 aa2.52□□□□□ -2.01
RTP1YMR185W TRK2P28584 889 aa2.52□□□□□ -2.01
RTP1YMR185W BDS1Q08347 646 aa2.52□□□□□ -2.01
RTP1YMR185W YBT1P32386 1661 aa2.51□□□□□ -2.01
RTP1YMR185W YJR098CP47139 656 aa2.51□□□□□ -2.01
RTP1YMR185W HPF1Q05164 967 aa2.51□□□□□ -2.01
RTP1YMR185W PDR5P33302 1511 aaKnown RBP2.51□□□□□ -2.01
RTP1YMR185W TY3B-GQ99315 1547 aa2.51□□□□□ -2.01
RTP1YMR185W YBL086CP38177 466 aa2.51□□□□□ -2.01
RTP1YMR185W TY1A-BLQ12266 440 aa2.51□□□□□ -2.01
RTP1YMR185W SSM4P40318 1319 aa2.5□□□□□ -2.01
RTP1YMR185W RAD59Q12223 238 aa2.5□□□□□ -2.01
RTP1YMR185W RQC2Q12532 1038 aaKnown RBP2.5□□□□□ -2.01
RTP1YMR185W GEA1P47102 1408 aaPredicted RBP2.5□□□□□ -2.01
RTP1YMR185W STH1P32597 1359 aa2.5□□□□□ -2.01
RTP1YMR185W DLD3P39976 496 aaKnown RBP2.5□□□□□ -2.01
RTP1YMR185W FIG4P42837 879 aa2.5□□□□□ -2.01
RTP1YMR185W YPR204WQ08995 1032 aa2.5□□□□□ -2.01
RTP1YMR185W IRC20Q06554 1556 aa2.49□□□□□ -2.01
RTP1YMR185W ENP1P38333 483 aaKnown RBP2.49□□□□□ -2.01
RTP1YMR185W MTC5Q03897 1148 aa2.49□□□□□ -2.01
RTP1YMR185W TY1B-JR2P47100 1755 aaKnown RBP2.49□□□□□ -2.01
RTP1YMR185W TY1B-ER2Q03619 1755 aa2.49□□□□□ -2.01
RTP1YMR185W TY1B-MR1Q04214 1755 aa2.49□□□□□ -2.01
RTP1YMR185W TY1B-MR2Q04670 1755 aaKnown RBP2.49□□□□□ -2.01
RTP1YMR185W TY1B-LR1Q12088 1755 aaKnown RBP2.49□□□□□ -2.01
RTP1YMR185W TY1B-NL1Q12112 1755 aa2.49□□□□□ -2.01
RTP1YMR185W TY1B-GR1Q12141 1755 aa2.49□□□□□ -2.01
RTP1YMR185W TY1B-BLQ12490 1755 aa2.49□□□□□ -2.01
RTP1YMR185W TSC11P40061 1430 aa2.49□□□□□ -2.01
RTP1YMR185W SNT2P53127 1403 aa2.49□□□□□ -2.01
RTP1YMR185W GCN2P15442 1659 aa2.49□□□□□ -2.01
RTP1YMR185W PAN1P32521 1480 aa2.49□□□□□ -2.01
RTP1YMR185W KTR1P27810 393 aaKnown RBP2.49□□□□□ -2.01
RTP1YMR185W EMW1P42842 904 aaKnown RBP2.49□□□□□ -2.01
RTP1YMR185W ROG3P43602 733 aa2.49□□□□□ -2.01
RTP1YMR185W SEC3P33332 1336 aaKnown RBP2.49□□□□□ -2.01
RTP1YMR185W RPP2BP02400 110 aaKnown RBP2.48□□□□□ -2.01
RTP1YMR185W PUS1Q12211 544 aaKnown RBP2.48□□□□□ -2.01
RTP1YMR185W GUT2P32191 649 aa2.48□□□□□ -2.01
RTP1YMR185W AIM7Q12156 149 aa2.48□□□□□ -2.01
RTP1YMR185W VTH1P40438 1549 aa2.48□□□□□ -2.01
RTP1YMR185W VTH2P40890 1549 aa2.48□□□□□ -2.01
RTP1YMR185W CAT8P39113 1433 aa2.48□□□□□ -2.01
RTP1YMR185W SSA2P10592 639 aaKnown RBP2.48□□□□□ -2.01
RTP1YMR185W DAT1P13483 248 aaKnown RBP2.47□□□□□ -2.01
RTP1YMR185W OSH7P38755 437 aa2.47□□□□□ -2.01
RTP1YMR185W NUP159P40477 1460 aa2.46□□□□□ -2.01
RTP1YMR185W FBP26P32604 452 aa2.46□□□□□ -2.02
RTP1YMR185W POL5P39985 1022 aaKnown RBP2.46□□□□□ -2.02
RTP1YMR185W ATG20Q07528 640 aa2.46□□□□□ -2.02
RTP1YMR185W RPO21P04050 1733 aaKnown RBP2.46□□□□□ -2.02
RTP1YMR185W VPS15P22219 1454 aa2.46□□□□□ -2.02
RTP1YMR185W RSC30P38781 883 aa2.46□□□□□ -2.02
RTP1YMR185W NSG2P53898 299 aa2.46□□□□□ -2.02
RTP1YMR185W TY1A-MR1Q04215 440 aa2.46□□□□□ -2.02
RTP1YMR185W CDC25P04821 1589 aa2.46□□□□□ -2.02
RTP1YMR185W DNF1P32660 1571 aa2.46□□□□□ -2.02
RTP1YMR185W NTE1Q04958 1679 aa2.46□□□□□ -2.02
RTP1YMR185W CEM1P39525 442 aa2.45□□□□□ -2.02
RTP1YMR185W STE20Q03497 939 aaKnown RBP2.45□□□□□ -2.02
RTP1YMR185W GEA2P39993 1459 aaKnown RBP2.45□□□□□ -2.02
RTP1YMR185W KIN1P13185 1064 aa2.45□□□□□ -2.02
RTP1YMR185W TBS1P38114 1094 aa2.45□□□□□ -2.02
RTP1YMR185W LSB3P43603 459 aaKnown RBP2.45□□□□□ -2.02
RTP1YMR185W LYS5P50113 272 aa2.45□□□□□ -2.02
RTP1YMR185W DPH6Q12429 685 aa2.45□□□□□ -2.02
RTP1YMR185W IQG1Q12280 1495 aa2.44□□□□□ -2.02
RTP1YMR185W YLR419WQ06698 1435 aaKnown RBP2.44□□□□□ -2.02
RTP1YMR185W YBL036CP38197 257 aa2.44□□□□□ -2.02
RTP1YMR185W YMR265CQ03508 461 aaKnown RBP2.44□□□□□ -2.02
RTP1YMR185W AHP1P38013 176 aaKnown RBP2.44□□□□□ -2.02
RTP1YMR185W ALA1P40825 983 aaKnown RBP2.44□□□□□ -2.02
RTP1YMR185W THI72Q08579 599 aa2.44□□□□□ -2.02
RTP1YMR185W MAK16P10962 306 aaPredicted RBP2.43□□□□□ -2.02
RTP1YMR185W PHM7Q12252 991 aa2.43□□□□□ -2.02
RTP1YMR185W RPA190P10964 1664 aaKnown RBP2.43□□□□□ -2.02
RTP1YMR185W ARO1P08566 1588 aaKnown RBP2.43□□□□□ -2.02
RTP1YMR185W CDC19P00549 500 aaKnown RBP2.43□□□□□ -2.02
RTP1YMR185W ISF1P32488 338 aa2.43□□□□□ -2.02
RTP1YMR185W UTR2P32623 467 aa2.43□□□□□ -2.02
RTP1YMR185W SRB8P25648 1427 aa2.43□□□□□ -2.02
RTP1YMR185W ICP55P40051 511 aa2.42□□□□□ -2.02
RTP1YMR185W ISU1Q03020 165 aa2.42□□□□□ -2.02
RTP1YMR185W PDR12Q02785 1511 aa2.42□□□□□ -2.02
RTP1YMR185W STE6P12866 1290 aa2.42□□□□□ -2.02
RTP1YMR185W MDJ1P35191 511 aa2.42□□□□□ -2.02
RTP1YMR185W ISR1Q06098 443 aaKnown RBP2.42□□□□□ -2.02
RTP1YMR185W TY3B-IQ7LHG5 1498 aaKnown RBP2.42□□□□□ -2.02
RTP1YMR185W AI1P03875 834 aa2.41□□□□□ -2.02
RTP1YMR185W BRL1P38770 471 aa2.41□□□□□ -2.02
RTP1YMR185W UTP7P40055 554 aaKnown RBP2.41□□□□□ -2.02
RTP1YMR185W EMP47P43555 445 aa2.41□□□□□ -2.02
RTP1YMR185W CUZ1P53899 274 aa2.41□□□□□ -2.02
RTP1YMR185W NAM8Q00539 523 aaKnown RBP2.41□□□□□ -2.02
RTP1YMR185W WTM2Q12206 467 aa2.41□□□□□ -2.02
RTP1YMR185W YOR093CQ12275 1648 aa2.41□□□□□ -2.02
RTP1YMR185W CCP1P00431 361 aa2.41□□□□□ -2.02
RTP1YMR185W SBP1P10080 294 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms